RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 PPP1CAP62136 330 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 SKP1P63208 163 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 IRX1P78414 480 aaPredicted RBP9.55□□□□□ -0.88
C4A-258ENST00000496659 CYP4F3Q08477 520 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 PWP1Q13610 501 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 NR6A1Q15406 480 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 TRIP6Q15654 476 aaKnown RBP9.55□□□□□ -0.88
C4A-258ENST00000496659 UGT3A2Q3SY77 523 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 ATP6AP1LQ52LC2 224 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 SGO1Q5FBB7 561 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 XKR7Q5GH72 579 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 TCTE1Q5JU00 501 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 SNAP47Q5SQN1 464 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 PRAMEF9Q5VWM5 478 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 RBM44Q6ZP01 1051 aaKnown RBP9.55□□□□□ -0.88
C4A-258ENST00000496659 USP53Q70EK8 1073 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 CHSY3Q70JA7 882 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 TRIM46Q7Z4K8 759 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 GLRX5Q86SX6 157 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 PIP4P1Q86T03 277 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 ASPGQ86U10 573 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 FAM20CQ8IXL6 584 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 SRFBP1Q8NEF9 429 aaKnown RBP9.55□□□□□ -0.88
C4A-258ENST00000496659 CEP70Q8NHQ1 597 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 HUS1BQ8NHY5 278 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 BCAS4Q8TDM0 211 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 TUBGCP3Q96CW5 907 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 METTL2AQ96IZ6 378 aaKnown RBP9.55□□□□□ -0.88
C4A-258ENST00000496659 RILPQ96NA2 401 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 CCT8L2Q96SF2 557 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 MTERF1Q99551 399 aaKnown RBP9.55□□□□□ -0.88
C4A-258ENST00000496659 ELAC2Q9BQ52 826 aaKnown RBP9.55□□□□□ -0.88
C4A-258ENST00000496659 CCDC28BQ9BUN5 200 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 TCF7L2Q9NQB0 619 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 DMRT3Q9NQL9 472 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 AHSPQ9NZD4 102 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 SEMA5BQ9P283 1151 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 DCTN4Q9UJW0 460 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 ATXN7L1Q9ULK2 861 aaPredicted RBP9.55□□□□□ -0.88
C4A-258ENST00000496659 PLCL2Q9UPR0 1127 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 TMED5Q9Y3A6 229 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 PCDHGA4Q9Y5G9 962 aa9.55□□□□□ -0.88
C4A-258ENST00000496659 ARHGEF17Q96PE2 2063 aaPredicted RBP9.55□□□□□ -0.88
C4A-258ENST00000496659 CEP295Q9C0D2 2601 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 A0A088AWK7 358 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 A0A0J9YVX5 310 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 ZSCAN9O15535 394 aaPredicted RBP9.54□□□□□ -0.88
C4A-258ENST00000496659 SNX3O60493 162 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 SRPX2O60687 465 aaPredicted RBP9.54□□□□□ -0.88
C4A-258ENST00000496659 SERPIND1P05546 499 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 SERPINA6P08185 405 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 LINC00032P0C843 101 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 MSL3P1P0C860 447 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 LBPP18428 481 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 NELFEP18615 380 aaKnown RBP9.54□□□□□ -0.88
C4A-258ENST00000496659 ZNF10P21506 573 aaPredicted RBP9.54□□□□□ -0.88
C4A-258ENST00000496659 PTX3P26022 381 aaPredicted RBP9.54□□□□□ -0.88
C4A-258ENST00000496659 BCL6P41182 706 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 LSSP48449 732 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 HTR6P50406 440 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 RAP1GDS1P52306 607 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 ARFIP1P53367 373 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 RPS13P62277 151 aaKnown RBP9.54□□□□□ -0.88
C4A-258ENST00000496659 YBX1P67809 324 aaKnown RBP9.54□□□□□ -0.88
C4A-258ENST00000496659 CYP4F2P78329 520 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 ACY1Q03154 408 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 CUL3Q13618 768 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 ABRAXAS2Q15018 415 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 SMU1Q2TAY7 513 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 TMEM35AQ53FP2 167 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 SPIN4Q56A73 249 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 SPDYAQ5MJ70 313 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 TCHHL1Q5QJ38 904 aaPredicted RBP9.54□□□□□ -0.88
C4A-258ENST00000496659 MANEAQ5SRI9 462 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 PHF19Q5T6S3 580 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 NXNQ6DKJ4 435 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 FCRL6Q6DN72 434 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 NIPAL1Q6NVV3 410 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 TRIM40Q6P9F5 258 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 EPGNQ6UW88 154 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 ATG14Q6ZNE5 492 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 PAGE2Q7Z2X7 111 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 FAM9CQ8IZT9 166 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 TTC29Q8NA56 475 aaPredicted RBP9.54□□□□□ -0.88
C4A-258ENST00000496659 CCDC197Q8NCU1 140 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 ZNF740Q8NDX6 193 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 NT5CQ8TCD5 201 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 ACTRT2Q8TDY3 377 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 ZNF473Q8WTR7 871 aaKnown RBP9.54□□□□□ -0.88
C4A-258ENST00000496659 SLC13A3Q8WWT9 602 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 KLHL6Q8WZ60 621 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 MTFMTQ96DP5 389 aaKnown RBP9.54□□□□□ -0.88
C4A-258ENST00000496659 THOC1Q96FV9 657 aaKnown RBP9.54□□□□□ -0.88
C4A-258ENST00000496659 SLC41A2Q96JW4 573 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 MAELQ96JY0 434 aaKnown RBP9.54□□□□□ -0.88
C4A-258ENST00000496659 CCDC74BQ96LY2 380 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 QRFPRQ96P65 431 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 TMEM120AQ9BXJ8 343 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 STRADBQ9C0K7 418 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 ROGDIQ9GZN7 287 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms