RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 GBP5Q96PP8 586 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 YIPF2Q9BWQ6 316 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 FAM117AQ9C073 453 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 DRC3Q9H069 523 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 IPPKQ9H8X2 491 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 ACTR8Q9H981 624 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 AKIRIN1Q9H9L7 192 aaPredicted RBP11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 GEMIN8Q9NWZ8 242 aaKnown RBP11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 SENP1Q9P0U3 644 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 MID2Q9UJV3 735 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 FARSAQ9Y285 508 aaKnown RBP11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 ASB1Q9Y576 335 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 DSPP15924 2871 aaKnown RBP11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 GOLGA6L10A6NI86 522 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 ZNF891A8MT65 544 aaPredicted RBP11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 A8MT66 165 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 E2F3O00716 465 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 P2RX6O15547 441 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 RAB40ALP0C0E4 278 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 MYL2P10916 166 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 PTPN4P29074 926 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 SCTRP47872 440 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 CCNG1P51959 295 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 SKP1P63208 163 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 CYP4F2P78329 520 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 SLC18A2Q05940 514 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 ZNF844Q08AG5 666 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 SRSF6Q13247 344 aaKnown RBP11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 FAM53BQ14153 422 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 SLC9A5Q14940 896 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 TBCCQ15814 346 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 RBBP7Q16576 425 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 BEND6Q5SZJ8 279 aaPredicted RBP11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 ARHGAP40Q5TG30 622 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 LIPJQ5W064 366 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 C19orf48Q6RUI8 117 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 LRIG3Q6UXM1 1119 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 ZNF517Q6ZMY9 492 aaPredicted RBP11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 ABHD13Q7L211 337 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 GOLGA7Q7Z5G4 137 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 VN1R4Q7Z5H5 301 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 IQCKQ8N0W5 287 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 METTL27Q8N6F8 245 aaPredicted RBP11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 STARD8Q92502 1023 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 TM4SF19Q96DZ7 209 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 MMABQ96EY8 250 aaPredicted RBP11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 APOPT1Q96IL0 206 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 SEC16BQ96JE7 1060 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 SLC45A3Q96JT2 553 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 MACROD1Q9BQ69 325 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 STMN4Q9H169 189 aaPredicted RBP11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 SPNS1Q9H2V7 528 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 NT5DC2Q9H857 520 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 CPNE5Q9HCH3 593 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 ANKHQ9HCJ1 492 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 ZNF304Q9HCX3 659 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 MAU2Q9Y6X3 613 aa11.51□□□□□ -0.57
CSNK1E-213ENST00000495232 LRRC14BA6NHZ5 514 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 K7ENP7 123 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 EFSO43281 561 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 CTIFO43310 598 aaKnown RBP11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 UGDHO60701 494 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 SUPT7LO94864 414 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 PCNAP12004 261 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 EPORP19235 508 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 FBLP22087 321 aaKnown RBP11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 HNF4AP41235 474 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 CASP2P42575 452 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 GCGRP47871 477 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 OR1D4P47884 311 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 STXBP1P61764 594 aaKnown RBP11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 HERVK_113P63132 956 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 PHEXP78562 749 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 NFKB2Q00653 900 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 OCA2Q04671 838 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 HERC3Q15034 1050 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 NCF4Q15080 339 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 ZNF385CQ66K41 422 aaPredicted RBP11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 TMEM214Q6NUQ4 689 aaKnown RBP11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 NIPAL1Q6NVV3 410 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 MED27Q6P2C8 311 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 INO80CQ6PI98 192 aaPredicted RBP11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 SH2D5Q6ZV89 423 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 TMEM151AQ8N4L1 468 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 ENDOVQ8N8Q3 282 aaKnown RBP11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 ANKRD53Q8N9V6 530 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 KCT2Q8NC54 265 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 MYRIPQ8NFW9 859 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 ZCCHC10Q8TBK6 192 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 RDH11Q8TC12 318 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 NT5CQ8TCD5 201 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 REPS1Q96D71 796 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 WDR34Q96EX3 536 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 C10orf90Q96M02 699 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 ERVK-6Q9BXR3 956 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 ACTL8Q9H568 366 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 NOL11Q9H8H0 719 aaKnown RBP11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 SYNPO2LQ9H987 977 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 IL17BQ9UHF5 180 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms