RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 EPS8L2Q9H6S3 715 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 ARL15Q9NXU5 204 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 HCN3Q9P1Z3 774 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 PCDHGA10Q9Y5H3 936 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 CPAMD8Q8IZJ3 1885 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 MYO7BQ6PIF6 2116 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 KCNE1BA0A087WTH5 132 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 A1L4Q6 167 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 PABPN1LA6NDY0 278 aaKnown RBP9.08□□□□□ -0.96
MSH5-218ENST00000494646 ANKUB1A6NFN9 424 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 POM121CA8CG34 1229 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 A8MUI8 341 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 H0YIG0 161 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 CDC7O00311 574 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 OR1F1O43749 312 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 SEC31AO94979 1220 aaKnown RBP9.08□□□□□ -0.96
MSH5-218ENST00000494646 B3GALT4O96024 378 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 ITGAMP11215 1152 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 FDXRP22570 491 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 GRK3P35626 688 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 RPL21P46778 160 aaKnown RBP9.08□□□□□ -0.96
MSH5-218ENST00000494646 ARG2P78540 354 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 MGAT5Q09328 741 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 MFAP5Q13361 173 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 ZNF460Q14592 562 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 ZNF169Q14929 603 aaPredicted RBP9.08□□□□□ -0.96
MSH5-218ENST00000494646 PCOLCEQ15113 449 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 C4orf17Q53FE4 359 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 DUPD1Q68J44 220 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 FAM45BPQ6NSW5 357 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 TMEM214Q6NUQ4 689 aaKnown RBP9.08□□□□□ -0.96
MSH5-218ENST00000494646 TMEM205Q6UW68 189 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 LANCL3Q6ZV70 420 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 STRA8Q7Z7C7 330 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 PDSS2Q86YH6 399 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 MFSD9Q8NBP5 474 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 CAMKVQ8NCB2 501 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 ZNF740Q8NDX6 193 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 FAM45AQ8TCE6 357 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 GRHL3Q8TE85 626 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 SSC4DQ8WTU2 575 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 METTL21AQ8WXB1 218 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 ANP32BQ92688 251 aaKnown RBP9.08□□□□□ -0.96
MSH5-218ENST00000494646 RUNDC3BQ96NL0 473 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 OR4K3Q96R72 315 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 SGPP1Q9BX95 441 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 UNKQ9C0B0 810 aaKnown RBP9.08□□□□□ -0.96
MSH5-218ENST00000494646 ANKHQ9HCJ1 492 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 AGPAT4Q9NRZ5 378 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 C14orf105Q9NVL8 296 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 ZFATQ9P243 1243 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 NAALAD2Q9Y3Q0 740 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 PSAT1Q9Y617 370 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 CELSR2Q9HCU4 2923 aa9.08□□□□□ -0.96
MSH5-218ENST00000494646 FAM95CA0A1B0GW59 222 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 ZNF860A6NHJ4 632 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 CCDC188H7C350 402 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 FANCGO15287 622 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 TP73O15350 636 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 RDH16O75452 317 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 CDC123O75794 336 aaPredicted RBP9.07□□□□□ -0.96
MSH5-218ENST00000494646 SEC24DO94855 1032 aaPredicted RBP9.07□□□□□ -0.96
MSH5-218ENST00000494646 NSA2O95478 260 aaKnown RBP9.07□□□□□ -0.96
MSH5-218ENST00000494646 SERPINA7P05543 415 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 C8orf89P0DMQ9 161 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 CCND1P24385 295 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 COL8A1P27658 744 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 HNF4AP41235 474 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 XCR1P46094 333 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 CCR8P51685 355 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 TAS2R39P59534 338 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 OLR1P78380 273 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 SP140Q13342 867 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 CSHL1Q14406 222 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 TLR1Q15399 786 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 TUSC1Q2TAM9 212 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 STEAP4Q687X5 459 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 CPEB2Q7Z5Q1 589 aaKnown RBP9.07□□□□□ -0.96
MSH5-218ENST00000494646 GALNT7Q86SF2 657 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 THOC6Q86W42 341 aaKnown RBP9.07□□□□□ -0.96
MSH5-218ENST00000494646 ZBED8Q8IZ13 594 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 OR5T3Q8NGG3 340 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 OR56A3Q8NH54 315 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 ANKRD49Q8WVL7 239 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 LRRC39Q96DD0 335 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 THAP11Q96EK4 314 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 PEX11GQ96HA9 241 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 IMMP1LQ96LU5 166 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 TSNARE1Q96NA8 513 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 HAUS8Q9BT25 410 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 RBCK1Q9BYM8 510 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 VN1R1Q9GZP7 353 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.07□□□□□ -0.96
MSH5-218ENST00000494646 ZNF700Q9H0M5 742 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 DPH5Q9H2P9 285 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 SPNS1Q9H2V7 528 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 STMN3Q9NZ72 180 aa9.07□□□□□ -0.96
MSH5-218ENST00000494646 PLEKHB1Q9UF11 243 aaPredicted RBP9.07□□□□□ -0.96
MSH5-218ENST00000494646 ERRFI1Q9UJM3 462 aaPredicted RBP9.07□□□□□ -0.96
MSH5-218ENST00000494646 SLC22A14Q9Y267 594 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms