RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 VWA7Q9Y334 891 aa12.57□□□□□ -0.4
ERCC3-209ENST00000494464 HMX2A2RU54 273 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 VSTM2BA6NLU5 285 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 EBAG9O00559 213 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 PEX12O00623 359 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 TXNDC9O14530 226 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 EIF2S1P05198 315 aaKnown RBP12.56□□□□□ -0.4
ERCC3-209ENST00000494464 ENO2P09104 434 aaPredicted RBP12.56□□□□□ -0.4
ERCC3-209ENST00000494464 DHRS4L1P0CG22 281 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 PYGBP11216 843 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 ZNF37AP17032 561 aaPredicted RBP12.56□□□□□ -0.4
ERCC3-209ENST00000494464 MMP11P24347 488 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 CCND1P24385 295 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 AP1S2P56377 157 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 PHKG1Q16816 387 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 DCAF10Q5QP82 559 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 GKAP1Q5VSY0 366 aaPredicted RBP12.56□□□□□ -0.4
ERCC3-209ENST00000494464 AGTRAPQ6RW13 159 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 ARHGEF39Q8N4T4 335 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 CSNK1A1LQ8N752 337 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 TEX19Q8NA77 164 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 CLEC1AQ8NC01 280 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 FDCSPQ8NFU4 85 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 TCP10LQ8TDR4 215 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.56□□□□□ -0.4
ERCC3-209ENST00000494464 RERGQ96A58 199 aaPredicted RBP12.56□□□□□ -0.4
ERCC3-209ENST00000494464 PDLIM5Q96HC4 596 aaKnown RBP12.56□□□□□ -0.4
ERCC3-209ENST00000494464 CABS1Q96KC9 395 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 SGPP1Q9BX95 441 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 RABEP2Q9H5N1 569 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 SYNPO2LQ9H987 977 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 ZNF304Q9HCX3 659 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 TMEM184CQ9NVA4 438 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 CUEDC1Q9NWM3 386 aaPredicted RBP12.56□□□□□ -0.4
ERCC3-209ENST00000494464 P4HTMQ9NXG6 502 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 GPR83Q9NYM4 423 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 TXNDC16Q9P2K2 825 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 CTSFQ9UBX1 484 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 RUVBL1Q9Y265 456 aaKnown RBP12.56□□□□□ -0.4
ERCC3-209ENST00000494464 ZNF451Q9Y4E5 1061 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 PSAT1Q9Y617 370 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 IGLV3-12A0A075B6K2 115 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 PABPN1LA6NDY0 278 aaKnown RBP12.56□□□□□ -0.4
ERCC3-209ENST00000494464 TCP11X1B4DZS4 312 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 PYCARD-AS1I3L0S3 204 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 COPEO14579 308 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 HAT1O14929 419 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 VIMP08670 466 aaKnown RBP12.56□□□□□ -0.4
ERCC3-209ENST00000494464 HIST1H2AGP0C0S8 130 aaPredicted RBP12.56□□□□□ -0.4
ERCC3-209ENST00000494464 HIST1H2ADP20671 130 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 ETV4P43268 484 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 MAGEA12P43365 314 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 OR1D4P47884 311 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 SOX8P57073 446 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 FOXL2P58012 376 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 RPS15AP62244 130 aaKnown RBP12.56□□□□□ -0.4
ERCC3-209ENST00000494464 BMPR2Q13873 1038 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 DSG2Q14126 1118 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 HHATQ5VTY9 493 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 LCTLQ6UWM7 567 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 MBOAT1Q6ZNC8 495 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 ADCK2Q7Z695 626 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 PIGWQ7Z7B1 504 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 ZC3HC1Q86WB0 502 aaKnown RBP12.56□□□□□ -0.4
ERCC3-209ENST00000494464 TMEM151BQ8IW70 566 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 DTWD1Q8N5C7 304 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 METTL27Q8N6F8 245 aaPredicted RBP12.56□□□□□ -0.4
ERCC3-209ENST00000494464 HIST1H2AHQ96KK5 128 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 RBBP8Q99708 897 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 SMAD5Q99717 465 aaKnown RBP12.56□□□□□ -0.4
ERCC3-209ENST00000494464 HIST1H2AJQ99878 128 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 MCMBPQ9BTE3 642 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 H2AFJQ9BTM1 129 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 NUDT9Q9BW91 350 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 FAM107BQ9H098 131 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 VPS11Q9H270 941 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 RHOJQ9H4E5 214 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 CLMPQ9H6B4 373 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 ZNF282Q9UDV7 671 aaPredicted RBP12.56□□□□□ -0.4
ERCC3-209ENST00000494464 CDC14AQ9UNH5 594 aa12.56□□□□□ -0.4
ERCC3-209ENST00000494464 UBR5O95071 2799 aaPredicted RBP12.55□□□□□ -0.4
ERCC3-209ENST00000494464 FAM95CA0A1B0GW59 222 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 GOLGA8RI6L899 631 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 P2RX6O15547 441 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 KLHL41O60662 606 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 ATXN8OSP0DMR3 200 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 TAC1P20366 129 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 FBLP22087 321 aaKnown RBP12.55□□□□□ -0.4
ERCC3-209ENST00000494464 CRHR1P34998 444 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 SPRP35270 261 aaPredicted RBP12.55□□□□□ -0.4
ERCC3-209ENST00000494464 HNRNPH2P55795 449 aaKnown RBP12.55□□□□□ -0.4
ERCC3-209ENST00000494464 KCNC4Q03721 635 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 FAM53BQ14153 422 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 HKDC1Q2TB90 917 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 VWA5B1Q5TIE3 1220 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 SBSNQ6UWP8 590 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 STRA8Q7Z7C7 330 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 C17orf64Q86WR6 236 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 OR56A3Q8NH54 315 aa12.55□□□□□ -0.4
ERCC3-209ENST00000494464 THAP11Q96EK4 314 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms