RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 NSMCE2Q96MF7 247 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 INPP5KQ9BT40 448 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 VCXQ9H320 206 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 OR51B5Q9H339 312 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 PIF1Q9H611 641 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 KAT8Q9H7Z6 458 aaKnown RBP13.49□□□□□ -0.25
PTPN7-216ENST00000492977 GORASP2Q9H8Y8 452 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 PRDM8Q9NQV8 689 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 AHSPQ9NZD4 102 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 EBF1Q9UH73 591 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 ATP6V1HQ9UI12 483 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 NDRG2Q9UN36 371 aaKnown RBP13.49□□□□□ -0.25
PTPN7-216ENST00000492977 INVSQ9Y283 1065 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 PCDHB11Q9Y5F2 797 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 COLEC10Q9Y6Z7 277 aa13.49□□□□□ -0.25
PTPN7-216ENST00000492977 ELOVL7A1L3X0 281 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 GABRR3A8MPY1 467 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 SEMA3DO95025 777 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 FCGR1AP12314 374 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 BMP2P12643 396 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 NCK1P16333 377 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 NDUFS1P28331 727 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 CCR5P51681 352 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 AQP4P55087 323 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 PRDX1Q06830 199 aaKnown RBP13.48□□□□□ -0.25
PTPN7-216ENST00000492977 HKDC1Q2TB90 917 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 DNAJC14Q6Y2X3 702 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-216ENST00000492977 ZNF852Q6ZMS4 543 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 VN1R5Q7Z5H4 357 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 R3HCC1LQ7Z5L2 792 aaKnown RBP13.48□□□□□ -0.25
PTPN7-216ENST00000492977 CALHM3Q86XJ0 350 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 SYNPOQ8N3V7 929 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 DTWD1Q8N5C7 304 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 ZNF548Q8NEK5 533 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-216ENST00000492977 OR52E4Q8NGH9 312 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 POP5Q969H6 163 aaKnown RBP13.48□□□□□ -0.25
PTPN7-216ENST00000492977 BIRC7Q96CA5 298 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 DUSP26Q9BV47 211 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 IKZF5Q9H5V7 419 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 RPF2Q9H7B2 306 aaKnown RBP13.48□□□□□ -0.25
PTPN7-216ENST00000492977 SLC6A13Q9NSD5 602 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 BTNL2Q9UIR0 455 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 ANAPC2Q9UJX6 822 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 PCOLCE2Q9UKZ9 415 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 USP22Q9UPT9 525 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 AURKCQ9UQB9 309 aa13.48□□□□□ -0.25
PTPN7-216ENST00000492977 OR52A4PA6NMU1 304 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 FAM220BPB1ANY3 271 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 CHURC1-FNTBB4DL54 471 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 C3orf80F5H4A9 247 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 H0Y8X5 98 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 H0YJX3 145 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 H7BY64 318 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 GSTA4O15217 222 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 TIPRLO75663 272 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 SCELO95171 688 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 ANXA6P08133 673 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 CHRNB1P11230 501 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 LAMP1P11279 417 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 UQCRBP14927 111 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 CDKN2CP42773 168 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 HSPA13P48723 471 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 GTF2A1P52655 376 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-216ENST00000492977 POLE2P56282 527 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 GTDC1Q4AE62 458 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 DEPDC1Q5TB30 811 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 GCNT7Q6ZNI0 430 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 SYT13Q7L8C5 426 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 PGBD3Q8N328 593 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 ANKFN1Q8N957 763 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 OR52E1Q8NGJ3 308 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 CDC26Q8NHZ8 85 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 EME1Q96AY2 570 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 FAM120BQ96EK7 910 aaKnown RBP13.47□□□□□ -0.25
PTPN7-216ENST00000492977 PDXPQ96GD0 296 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 PRAP1Q96NZ9 151 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 PANX1Q96RD7 426 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 NR1H4Q96RI1 486 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-216ENST00000492977 NRTNQ99748 197 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 REEP4Q9H6H4 257 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 KIR3DX1Q9H7L2 352 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 MYNNQ9NPC7 610 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 CUEDC1Q9NWM3 386 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-216ENST00000492977 CA5BQ9Y2D0 317 aa13.47□□□□□ -0.25
PTPN7-216ENST00000492977 WBP11Q9Y2W2 641 aaKnown RBP13.47□□□□□ -0.25
PTPN7-216ENST00000492977 EVPLLA8MZ36 301 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 PRAMEF26H0Y7S4 382 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 GSNP06396 782 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 ZCCHC18P0CG32 403 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 PIM1P11309 404 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-216ENST00000492977 FASP25445 335 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 PSMB5P28074 263 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 OXTRP30559 389 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 GZMMP51124 257 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 ABATP80404 500 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 KLC1Q07866 573 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 ABHD18Q0P651 414 aa13.46□□□□□ -0.25
PTPN7-216ENST00000492977 CCDC85BQ15834 202 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-216ENST00000492977 KHDRBS2Q5VWX1 349 aaKnown RBP13.46□□□□□ -0.25
PTPN7-216ENST00000492977 ANO7Q6IWH7 933 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms