RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 UGT3A1Q6NUS8 523 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 HIBCHQ6NVY1 386 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-212ENST00000492407 XKRXQ6PP77 449 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 GFRALQ6UXV0 394 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 BNC2Q6ZN30 1099 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-212ENST00000492407 CPEB2Q7Z5Q1 589 aaKnown RBP8.64□□□□□ -1.03
HDAC3-212ENST00000492407 FJX1Q86VR8 437 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 TRIM42Q8IWZ5 723 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 DTWD1Q8N5C7 304 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 ARL6IP6Q8N6S5 226 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 SIRT6Q8N6T7 355 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 HORMAD2Q8N7B1 307 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 PRELID2Q8N945 189 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 CAMKVQ8NCB2 501 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 TRIM58Q8NG06 486 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 GABPB2Q8TAK5 448 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-212ENST00000492407 M1APQ8TC57 530 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 MIPOL1Q8TD10 442 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 THAP3Q8WTV1 239 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-212ENST00000492407 TM4SF19Q96DZ7 209 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 VMP1Q96GC9 406 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 MAGEB10Q96LZ2 347 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-212ENST00000492407 CCDC138Q96M89 665 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 SARGQ9BW04 601 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 CLK4Q9HAZ1 481 aaKnown RBP8.64□□□□□ -1.03
HDAC3-212ENST00000492407 PLA2G3Q9NZ20 509 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 SEC14L3Q9UDX4 400 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 PCYOX1Q9UHG3 505 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 SLC22A7Q9Y694 548 aa8.64□□□□□ -1.03
HDAC3-212ENST00000492407 ZCWPW2A0A1B0GU75 182 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 CTAGE9A4FU28 777 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 PRSS44E7EML9 344 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 H7BY64 318 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 HAT1O14929 419 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 ITGAMP11215 1152 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 BCL6P41182 706 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 CA7P43166 264 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 SKP1P63208 163 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 SLC7A5Q01650 507 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 EEF1A2Q05639 463 aaKnown RBP8.63□□□□□ -1.03
HDAC3-212ENST00000492407 SP140Q13342 867 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 ZNF630Q2M218 657 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-212ENST00000492407 ACER2Q5QJU3 275 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 ZNF470Q6ECI4 717 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 TMEM214Q6NUQ4 689 aaKnown RBP8.63□□□□□ -1.03
HDAC3-212ENST00000492407 CASC4Q6P4E1 433 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 CES3Q6UWW8 571 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 CAND1Q86VP6 1230 aaKnown RBP8.63□□□□□ -1.03
HDAC3-212ENST00000492407 PLPP5Q8NEB5 264 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 ITLN2Q8WWU7 325 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-212ENST00000492407 DHRS1Q96LJ7 313 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 PRAP1Q96NZ9 151 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 OR1F2PQ96R84 312 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 MESP1Q9BRJ9 268 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 VN1R1Q9GZP7 353 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 MMP25Q9NPA2 562 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 CCDC177Q9NQR7 707 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-212ENST00000492407 GALPQ9UBC7 116 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 MED16Q9Y2X0 877 aa8.63□□□□□ -1.03
HDAC3-212ENST00000492407 TRGV8A0A0C4DH27 118 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 TCRBV7S3A2A0A539 114 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 KRT87PA6NCN2 255 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 ASPDHA6ND91 283 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 GOLGA8KD6RF30 607 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 GOLGA8TH3BQL2 631 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 CCL21O00585 134 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 TTI1O43156 1089 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 CEP104O60308 925 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 UNC5CO95185 931 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 SYF2O95926 243 aaKnown RBP8.62□□□□□ -1.03
HDAC3-212ENST00000492407 C8GP07360 202 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 ENPP1P22413 925 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 IMPA1P29218 277 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 GRK3P35626 688 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 KCNJ1P48048 391 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 RGS4P49798 205 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 SMSP52788 366 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 KCNK10P57789 538 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 MPP1Q00013 466 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 ZNF33BQ06732 778 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 COX10Q12887 443 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 GPS1Q13098 491 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 HERC3Q15034 1050 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 MEP1AQ16819 746 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 ZNF766Q5HY98 468 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 THEMIS2Q5TEJ8 643 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 ZNF549Q6P9A3 640 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 Q6ZPB1 254 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-212ENST00000492407 UBE2R2Q712K3 238 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-212ENST00000492407 VN1R4Q7Z5H5 301 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 ADCK2Q7Z695 626 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 STRA8Q7Z7C7 330 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 MRGPRGQ86SM5 289 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 MCEMP1Q8IX19 187 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 PALM2Q8IXS6 379 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 OR51Q1Q8NH59 317 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 GIMAP7Q8NHV1 300 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 CD200R1Q8TD46 325 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 NAP1L3Q99457 506 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-212ENST00000492407 HAUS8Q9BT25 410 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms