RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 EZH1Q92800 747 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-220ENST00000492280 GLMNQ92990 594 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 DTD2Q96FN9 168 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 HHIPQ96QV1 700 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 IL23AQ9NPF7 189 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 C3orf18Q9UK00 162 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 RUVBL1Q9Y265 456 aaKnown RBP11.98□□□□□ -0.49
HMGN1-220ENST00000492280 TMED5Q9Y3A6 229 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 MAP4K5Q9Y4K4 846 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 SCN2AQ99250 2005 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 EIF3FO00303 357 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-220ENST00000492280 LZTS3O60299 673 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-220ENST00000492280 ABCB7O75027 752 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 FABP3P05413 133 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 CISD3P0C7P0 127 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 NPPBP16860 134 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 ZNF8P17098 575 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-220ENST00000492280 IDSP22304 550 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 PRPH2P23942 346 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 SLC19A1P41440 591 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 FPGSQ05932 587 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 GPR153Q6NV75 609 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 KLHL35Q6PF15 583 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 SLCO4C1Q6ZQN7 724 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 FAM20CQ8IXL6 584 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 SMYD1Q8NB12 490 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 SPPL2AQ8TCT8 520 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 ZNF707Q96C28 371 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-220ENST00000492280 NUS1Q96E22 293 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 C19orf43Q9BQ61 176 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 ABCG4Q9H172 646 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 ARMC7Q9H6L4 198 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 KIF17Q9P2E2 1029 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 KLHL42Q9P2K6 505 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 ERVK-18Q9QC07 812 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 KIF26AQ9ULI4 1882 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-220ENST00000492280 C2orf16Q68DN1 1984 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 J3KTA2 159 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 SLC16A5O15375 505 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 EFCAB14O75071 495 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 CPNE6O95741 557 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 ANGPTL1O95841 491 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 HPRP00739 348 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 KLK1P06870 262 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 HTR1BP28222 390 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 SOAT1P35610 550 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 BMPR1AP36894 532 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 RANBP1P43487 201 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 CNTN1Q12860 1018 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 CSTF3Q12996 717 aaKnown RBP11.97□□□□□ -0.49
HMGN1-220ENST00000492280 SPCS2Q15005 226 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 MPEG1Q2M385 716 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 ZNF691Q5VV52 312 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 B3GNT8Q7Z7M8 397 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 PLD3Q8IV08 490 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 CCDC71Q8IV32 467 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-220ENST00000492280 NPAS3Q8IXF0 933 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 SVOPLQ8N434 492 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 LEMD2Q8NC56 503 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 KLK6Q92876 244 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 C11orf24Q96F05 449 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-220ENST00000492280 FOPNLQ96NB1 174 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 OSBPL6Q9BZF3 934 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 TIMMDC1Q9NPL8 285 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 C8orf4Q9NR00 106 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 TBC1D14Q9P2M4 693 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 SAMD4AQ9UPU9 718 aaKnown RBP11.97□□□□□ -0.49
HMGN1-220ENST00000492280 KCNE2Q9Y6J6 123 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 PIPSLA2A3N6 862 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 KIAA0355O15063 1070 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 KPNA5O15131 536 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 GCM2O75603 506 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-220ENST00000492280 FADS2O95864 444 aaKnown RBP11.97□□□□□ -0.49
HMGN1-220ENST00000492280 HOXA9P31269 272 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 TIA1P31483 386 aaKnown RBP eCLIP11.97□□□□□ -0.492e-6■■□□□ 12.1
HMGN1-220ENST00000492280 HNF4AP41235 474 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 MAGEA2P43356 314 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 TAS2R50P59544 299 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 OCA2Q04671 838 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 NFATC3Q12968 1075 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 CDKL4Q5MAI5 379 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 SERPINA11Q86U17 422 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 SLC44A2Q8IWA5 706 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-220ENST00000492280 CHCHD4Q8N4Q1 142 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 OR56A3Q8NH54 315 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 FUNDC2Q9BWH2 189 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 LGR4Q9BXB1 951 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 IL1RAPQ9NPH3 570 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 THUMPD1Q9NXG2 353 aaKnown RBP11.97□□□□□ -0.49
HMGN1-220ENST00000492280 SPASTQ9UBP0 616 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 MAFFQ9ULX9 164 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 PCDHB11Q9Y5F2 797 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 SCN3AQ9NY46 2000 aa11.97□□□□□ -0.49
HMGN1-220ENST00000492280 HEPACAM2A8MVW5 462 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 H0YIV9 168 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 LILRB5O75023 590 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 POP7O75817 140 aaKnown RBP11.96□□□□□ -0.49
HMGN1-220ENST00000492280 MYO1DO94832 1006 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 AP2A2O94973 939 aa11.96□□□□□ -0.49
HMGN1-220ENST00000492280 VIPP01282 170 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms