RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, human

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTN4-215	ENST00000491592	C4orf19	Q8IY42	314 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	MMP21	Q8N119	569 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	METTL13	Q8N6R0	699 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	ANKRD13C	Q8N6S4	541 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	LRRC57	Q8N9N7	239 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	UXS1	Q8NBZ7	420 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	FAM98A	Q8NCA5	519 aa	Known RBP	4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	DBF4B	Q8NFT6	615 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	OR10T2	Q8NGX3	314 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	MAFA	Q8NHW3	353 aa	Predicted RBP	4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	TBC1D16	Q8TBP0	767 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	PAQR8	Q8TEZ7	354 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	ATP8B4	Q8TF62	1192 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	OVCA2	Q8WZ82	227 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	LZIC	Q8WZA0	190 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	AZIN2	Q96A70	460 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	MIB2	Q96AX9	1013 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	SLC41A2	Q96JW4	573 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	SPATA13	Q96N96	652 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	WDFY2	Q96P53	400 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	SERPINB12	Q96P63	405 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	PSMB7	Q99436	277 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	SELENOS	Q9BQE4	189 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	HAUS8	Q9BT25	410 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	INPP5K	Q9BT40	448 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	CINP	Q9BW66	212 aa	Predicted RBP	4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	TRIM4	Q9C037	500 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	YIPF3	Q9GZM5	350 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	ADNP	Q9H2P0	1102 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	HRH4	Q9H3N8	390 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	RIOX1	Q9H6W3	641 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	TDRD3	Q9H7E2	651 aa	Known RBP	4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	RNPEPL1	Q9HAU8	725 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	TLR8	Q9NR97	1041 aa	Known RBP	4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	DDX28	Q9NUL7	540 aa	Known RBP	4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	FBXO28	Q9NVF7	368 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	ASIC5	Q9NY37	505 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	WSB2	Q9NYS7	404 aa	Predicted RBP	4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	PKD2L2	Q9NZM6	624 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	ADAM22	Q9P0K1	906 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	GAB2	Q9UQC2	676 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	L3MBTL1	Q9Y468	752 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	AP4B1	Q9Y6B7	739 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	UBE4B	O95155	1302 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	PCDH11X	Q9BZA7	1347 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	RIC1	Q4ADV7	1423 aa		4.61	□□□□□ -1.67
RTN4-215	ENST00000491592	LOC102723996	A0A087X1L8	192 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	C13orf42	A0A1B0GVH6	325 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	HEATR9	A2RTY3	570 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	DPPA5	A6NC42	116 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	FAM90A7P	A6NKC0	464 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	SDR42E2	A6NKP2	422 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	FAM90A22P	A8MWA6	464 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	FAM90A12P	A8MX19	464 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	FAM90A23P	A8MXZ1	464 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	EPHB6	O15197	1021 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	PAPSS1	O43252	624 aa	Predicted RBP	4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	B4GALT2	O60909	372 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	ECI2	O75521	394 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	GCAT	O75600	419 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	SERPINI2	O75830	405 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	NOL4	O94818	638 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	CLPTM1	O96005	669 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	RLN1	P04808	185 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	UROD	P06132	367 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	OR52Z1	P0C646	297 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	C8orf89	P0DMQ9	161 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	CALCB	P10092	127 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	ODC1	P11926	461 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	ZNF37A	P17032	561 aa	Predicted RBP	4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	ADRA2C	P18825	462 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	ACHE	P22303	614 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	RRM2	P31350	389 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	PCK1	P35558	622 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	TRIM23	P36406	574 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	FRK	P42685	505 aa	Predicted RBP	4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	ALDH7A1	P49419	539 aa	Known RBP	4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	PROK1	P58294	105 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	DSTN	P60981	165 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	KCNJ2	P63252	427 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	HOXA4	Q00056	320 aa	Predicted RBP	4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	OTUD4	Q01804	1114 aa	Known RBP	4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	PPIL2	Q13356	520 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	DNASE1L3	Q13609	305 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	MAPRE2	Q15555	327 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	C6orf136	Q5SQH8	315 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	SUMO4	Q6EEV6	95 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	KIAA0930	Q6ICG6	404 aa	Predicted RBP	4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	DEGS2	Q6QHC5	323 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	C1orf186	Q6ZWK4	172 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	ERICH1	Q86X53	443 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	PYROXD2	Q8N2H3	581 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	CMAS	Q8NFW8	434 aa	Predicted RBP	4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	OR6S1	Q8NH40	331 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	FAM81A	Q8TBF8	368 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	DYDC1	Q8WWB3	177 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	CKAP2	Q8WWK9	683 aa		4.6	□□□□□ -1.67
RTN4-215	ENST00000491592	KLHL15	Q96M94	604 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms