RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 TK2O00142 265 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 FOXS1O43638 330 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 CNOT3O75175 753 aaKnown RBP15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 SMIM24O75264 130 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 CDH16O75309 829 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 KLF7O75840 302 aaPredicted RBP15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ALBP02768 609 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 SERPIND1P05546 499 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 TUBBP07437 444 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 FURINP09958 794 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 EPORP19235 508 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 FBLP22087 321 aaKnown RBP15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 FOLR3P41439 243 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 RGS1Q08116 209 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PWP1Q13610 501 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 NAA30Q147X3 362 aaPredicted RBP15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 XKR6Q5GH73 641 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 FAM69BQ5VUD6 431 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ANKRD53Q8N9V6 530 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 KCT2Q8NC54 265 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 TRPV3Q8NET8 790 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ZCCHC10Q8TBK6 192 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 NT5CQ8TCD5 201 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 COL26A1Q96A83 441 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 WDR34Q96EX3 536 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PTCD3Q96EY7 689 aaKnown RBP15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 MMABQ96EY8 250 aaPredicted RBP15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PITHD1Q9GZP4 211 aaPredicted RBP15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 SLC26A1Q9H2B4 701 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 NT5DC2Q9H857 520 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 WDR54Q9H977 334 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 CTSFQ9UBX1 484 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 POLHQ9Y253 713 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 MRPS2Q9Y399 296 aaKnown RBP15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PTRH2Q9Y3E5 179 aaKnown RBP15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ANGPTL3Q9Y5C1 460 aa15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 TNPO3Q9Y5L0 923 aaKnown RBP15.48■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 A0A0A6YYC8 382 aaPredicted RBP15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 I3L1I5 382 aaPredicted RBP15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PRAMEF4O60810 478 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 GSTA1P08263 222 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PYGBP11216 843 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 EPB42P16452 691 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 KRT15P19012 456 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 AVPR1BP47901 424 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 SNRPNP63162 240 aaKnown RBP15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 IRF8Q02556 426 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 IFFO1Q0D2I5 559 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 CHIT1Q13231 466 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 DSG2Q14126 1118 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 DOC2AQ14183 400 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PCBP2Q15366 365 aaKnown RBP eCLIP15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 NKG7Q16617 165 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 TBR1Q16650 682 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 DEFB109BQ30KR1 87 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PRAMEF9Q5VWM5 478 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 METTL2BQ6P1Q9 378 aaKnown RBP15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 BORAQ6PGQ7 559 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 TMIGD1Q6UXZ0 262 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 TEX9Q8N6V9 391 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PTGR2Q8N8N7 351 aaPredicted RBP15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 TTLQ8NG68 377 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 OR2Y1Q8NGV0 311 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 OR2W6PQ8NHA6 318 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 EXTL1Q92935 676 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PHF21BQ96EK2 531 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 MOCOSQ96EN8 888 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 EFCAB11Q9BUY7 163 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 COPG2Q9UBF2 871 aa15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 NXT1Q9UKK6 140 aaKnown RBP15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 DSPP15924 2871 aaKnown RBP15.47■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 A0A1W2PPM1 405 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 LRRC14BA6NHZ5 514 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 STX16-NPEPL1H3BU86 382 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 STX16O14662 325 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 NSA2O95478 260 aaKnown RBP15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 IL1RNP18510 177 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 GSTM2P28161 218 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 EEF1DP29692 281 aaKnown RBP15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 CASP2P42575 452 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PIK3CGP48736 1102 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 LAPTM5Q13571 262 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 TBCCQ15814 346 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PAGE2BQ5JRK9 111 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 PRSS41Q7RTY9 318 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 RAB43Q86YS6 212 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 CYP4X1Q8N118 509 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 RIBC1Q8N443 379 aaPredicted RBP15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 MREGQ8N565 214 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 AMER3Q8N944 861 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 OR9A4Q8NGU2 314 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ADAMTS17Q8TE56 1095 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 THAP4Q8WY91 577 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ANKHQ9HCJ1 492 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 TMEM216Q9P0N5 145 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 ZNF282Q9UDV7 671 aaPredicted RBP15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 MAN2B2Q9Y2E5 1009 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 SLC22A7Q9Y694 548 aa15.46■□□□□ 0.07
MSH5-SAPCD1-206ENST00000491552 IGLV3-12A0A075B6K2 115 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms