RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 TAS2R39P59534 338 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 ZNF460Q14592 562 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 PPP1R3AQ16821 1122 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 CATSPEREQ5SY80 951 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 PDSS2Q86YH6 399 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 ZNF740Q8NDX6 193 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 OR51Q1Q8NH59 317 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 ZCCHC10Q8TBK6 192 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 BRIX1Q8TDN6 353 aaKnown RBP17.03■□□□□ 0.32
HMGN1-219ENST00000491183 MOCOSQ96EN8 888 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 IMMP1LQ96LU5 166 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 CYTH2Q99418 400 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 MCMBPQ9BTE3 642 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 SARGQ9BW04 601 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 VN1R1Q9GZP7 353 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 HCN3Q9P1Z3 774 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 PTGFRNQ9P2B2 879 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 PRRC2CQ9Y520 2896 aaKnown RBP17.03■□□□□ 0.32
HMGN1-219ENST00000491183 FAM95CA0A1B0GW59 222 aa17.02■□□□□ 0.32
HMGN1-219ENST00000491183 GP1BBP13224 206 aa17.02■□□□□ 0.32
HMGN1-219ENST00000491183 GRK3P35626 688 aa17.02■□□□□ 0.32
HMGN1-219ENST00000491183 SOX11P35716 441 aa17.02■□□□□ 0.32
HMGN1-219ENST00000491183 CCR8P51685 355 aa17.02■□□□□ 0.32
HMGN1-219ENST00000491183 ZNF169Q14929 603 aaPredicted RBP17.02■□□□□ 0.32
HMGN1-219ENST00000491183 CEP97Q8IW35 865 aa17.02■□□□□ 0.32
HMGN1-219ENST00000491183 ZBED8Q8IZ13 594 aa17.02■□□□□ 0.32
HMGN1-219ENST00000491183 SPATA4Q8NEY3 305 aa17.02■□□□□ 0.32
HMGN1-219ENST00000491183 PRR7Q8TB68 274 aa17.02■□□□□ 0.32
HMGN1-219ENST00000491183 ANKRD49Q8WVL7 239 aa17.02■□□□□ 0.32
HMGN1-219ENST00000491183 ATL1Q8WXF7 558 aa17.02■□□□□ 0.32
HMGN1-219ENST00000491183 NEIL2Q969S2 332 aa17.02■□□□□ 0.32
HMGN1-219ENST00000491183 ERP44Q9BS26 406 aa17.02■□□□□ 0.32
HMGN1-219ENST00000491183 FAM129AQ9BZQ8 928 aa17.02■□□□□ 0.32
HMGN1-219ENST00000491183 SPNS1Q9H2V7 528 aa17.02■□□□□ 0.32
HMGN1-219ENST00000491183 RIC8BQ9NVN3 520 aa17.02■□□□□ 0.32
HMGN1-219ENST00000491183 SLC22A7Q9Y694 548 aa17.02■□□□□ 0.32
HMGN1-219ENST00000491183 TRBC2A0A5B9 178 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 PABPN1LA6NDY0 278 aaKnown RBP17.01■□□□□ 0.31
HMGN1-219ENST00000491183 OR1F1O43749 312 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 DNAJB6O75190 326 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 RDH16O75452 317 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 C8orf89P0DMQ9 161 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 ITGAMP11215 1152 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 TSFMP43897 325 aaKnown RBP17.01■□□□□ 0.31
HMGN1-219ENST00000491183 XCR1P46094 333 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 TLR1Q15399 786 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 B3GNTL1Q67FW5 361 aaPredicted RBP17.01■□□□□ 0.31
HMGN1-219ENST00000491183 CAPN12Q6ZSI9 719 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 LANCL3Q6ZV70 420 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 NKAPQ8N5F7 415 aaKnown RBP17.01■□□□□ 0.31
HMGN1-219ENST00000491183 SIRT6Q8N6T7 355 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 ANKRD7Q92527 254 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 CNDP1Q96KN2 507 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 DPH5Q9H2P9 285 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 ANKHQ9HCJ1 492 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 LRRC4CQ9HCJ2 640 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 PLA2G3Q9NZ20 509 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 NAALAD2Q9Y3Q0 740 aa17.01■□□□□ 0.31
HMGN1-219ENST00000491183 USP9YO00507 2555 aaPredicted RBP17■□□□□ 0.31
HMGN1-219ENST00000491183 IGHV3-20A0A0C4DH32 117 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 CTAGE15A4D2H0 777 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 NPEPPSL1A6NEC2 478 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 FAM187AA6NFU0 413 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 CXorf49A8MYA2 514 aaPredicted RBP17■□□□□ 0.31
HMGN1-219ENST00000491183 RAD51CO43502 376 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 SLC35G6P0C7Q6 338 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 SSTR1P30872 391 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 CSHL1Q14406 222 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 MINDY4Q4G0A6 757 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 RIPOR1Q6ZS17 1223 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 CTAGE6Q86UF2 777 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 THOC6Q86W42 341 aaKnown RBP17■□□□□ 0.31
HMGN1-219ENST00000491183 CPAMD8Q8IZJ3 1885 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 C17orf53Q8N3J3 647 aaPredicted RBP17■□□□□ 0.31
HMGN1-219ENST00000491183 AFAP1L2Q8N4X5 818 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 BBOF1Q8ND07 529 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 SSC4DQ8WTU2 575 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 PYROXD1Q8WU10 500 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 SLC5A11Q8WWX8 675 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 METTL21AQ8WXB1 218 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 SCN2AQ99250 2005 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 RHOJQ9H4E5 214 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 GRHL1Q9NZI5 618 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 WHRNQ9P202 907 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 SLC22A14Q9Y267 594 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 HIVEP3Q5T1R4 2406 aa17■□□□□ 0.31
HMGN1-219ENST00000491183 ICE1Q9Y2F5 2266 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 ANKUB1A6NFN9 424 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 ZNF860A6NHJ4 632 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 WFS1O76024 890 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 SEC24DO94855 1032 aaPredicted RBP16.99■□□□□ 0.31
HMGN1-219ENST00000491183 WISP3O95389 354 aaPredicted RBP16.99■□□□□ 0.31
HMGN1-219ENST00000491183 B3GALT4O96024 378 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 CYC1P08574 325 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 SCTRP47872 440 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 C2orf54Q08AI8 447 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 CDC16Q13042 620 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 PWP1Q13610 501 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 MFSD4BQ5TF39 518 aa16.99■□□□□ 0.31
HMGN1-219ENST00000491183 CPEB2Q7Z5Q1 589 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms