RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 FAM45BPQ6NSW5 357 aa11.17□□□□□ -0.62
SRSF4-204ENST00000489898 ZNF572Q7Z3I7 529 aaPredicted RBP11.17□□□□□ -0.62
SRSF4-204ENST00000489898 VN1R5Q7Z5H4 357 aa11.17□□□□□ -0.62
SRSF4-204ENST00000489898 SLC26A11Q86WA9 606 aa11.17□□□□□ -0.62
SRSF4-204ENST00000489898 ATCAYQ86WG3 371 aa11.17□□□□□ -0.62
SRSF4-204ENST00000489898 IQCKQ8N0W5 287 aa11.17□□□□□ -0.62
SRSF4-204ENST00000489898 CISD2Q8N5K1 135 aaKnown RBP11.17□□□□□ -0.62
SRSF4-204ENST00000489898 MFSD9Q8NBP5 474 aa11.17□□□□□ -0.62
SRSF4-204ENST00000489898 FBXO36Q8NEA4 188 aa11.17□□□□□ -0.62
SRSF4-204ENST00000489898 ZCCHC10Q8TBK6 192 aa11.17□□□□□ -0.62
SRSF4-204ENST00000489898 FAM45AQ8TCE6 357 aa11.17□□□□□ -0.62
SRSF4-204ENST00000489898 TRIM44Q96DX7 344 aaPredicted RBP11.17□□□□□ -0.62
SRSF4-204ENST00000489898 MMABQ96EY8 250 aaPredicted RBP11.17□□□□□ -0.62
SRSF4-204ENST00000489898 SMIM10Q96HG1 83 aa11.17□□□□□ -0.62
SRSF4-204ENST00000489898 THOC3Q96J01 351 aaKnown RBP11.17□□□□□ -0.62
SRSF4-204ENST00000489898 CCDC68Q9H2F9 335 aa11.17□□□□□ -0.62
SRSF4-204ENST00000489898 COPG2Q9UBF2 871 aa11.17□□□□□ -0.62
SRSF4-204ENST00000489898 ASB1Q9Y576 335 aa11.17□□□□□ -0.62
SRSF4-204ENST00000489898 SAR1BQ9Y6B6 198 aa11.17□□□□□ -0.62
SRSF4-204ENST00000489898 PCNX1Q96RV3 2341 aa11.17□□□□□ -0.62
SRSF4-204ENST00000489898 MYO9AB2RTY4 2548 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 IGHV3-20A0A0C4DH32 117 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 FAM95CA0A1B0GW59 222 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 ZNF860A6NHJ4 632 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 ZNF839A8K0R7 811 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 TGFBR3LH3BV60 316 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 MAP2K7O14733 419 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 CLDN1O95832 211 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 PIM1P11309 404 aaPredicted RBP11.16□□□□□ -0.62
SRSF4-204ENST00000489898 SCTRP47872 440 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 AP1S2P56377 157 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 GTF3C1Q12789 2109 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 TSTA3Q13630 321 aaPredicted RBP11.16□□□□□ -0.62
SRSF4-204ENST00000489898 EIF2S3LQ2VIR3 472 aaKnown RBP11.16□□□□□ -0.62
SRSF4-204ENST00000489898 DUPD1Q68J44 220 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 STRA8Q7Z7C7 330 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 MYO1HQ8N1T3 1032 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 CATSPER1Q8NEC5 780 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 CREB3L4Q8TEY5 395 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 TSLPQ969D9 159 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 COL26A1Q96A83 441 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 VPS39Q96JC1 886 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 KRT12Q99456 494 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 TRIM31Q9BZY9 425 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 SLC6A16Q9GZN6 736 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 ABCF3Q9NUQ8 709 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 HCN3Q9P1Z3 774 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 SNX24Q9Y343 169 aa11.16□□□□□ -0.62
SRSF4-204ENST00000489898 IGKV3D-11A0A0A0MRZ8 115 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 TRBC2A0A5B9 178 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 FAM159BA6NKW6 160 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 SGK494L7N484 410 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 GALR3O60755 368 aaPredicted RBP11.15□□□□□ -0.62
SRSF4-204ENST00000489898 IPO13O94829 963 aaKnown RBP11.15□□□□□ -0.62
SRSF4-204ENST00000489898 ALPPP05187 535 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 SERPINA7P05543 415 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 CYC1P08574 325 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 ENO2P09104 434 aaPredicted RBP11.15□□□□□ -0.62
SRSF4-204ENST00000489898 CD22P20273 847 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 SSTR1P30872 391 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 TNFSF10P50591 281 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 EMP2P54851 167 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 C2orf54Q08AI8 447 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 MGAT5Q09328 741 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 DLG1Q12959 904 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 PDIA2Q13087 525 aaKnown RBP11.15□□□□□ -0.62
SRSF4-204ENST00000489898 E2F2Q14209 437 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 ZNF169Q14929 603 aaPredicted RBP11.15□□□□□ -0.62
SRSF4-204ENST00000489898 TSNQ15631 228 aaKnown RBP11.15□□□□□ -0.62
SRSF4-204ENST00000489898 FAAH2Q6GMR7 532 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 H3F3CQ6NXT2 135 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 NDUFAF7Q7L592 441 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 ADCK2Q7Z695 626 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 ASPGQ86U10 573 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 C17orf64Q86WR6 236 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 PDIK1LQ8N165 341 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 SIRT6Q8N6T7 355 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 GPATCH11Q8N954 259 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 SPATA4Q8NEY3 305 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 NT5CQ8TCD5 201 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 THAP11Q96EK4 314 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 RBCK1Q9BYM8 510 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 RHOJQ9H4E5 214 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 SLAMF7Q9NQ25 335 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 VWA7Q9Y334 891 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 SLC22A7Q9Y694 548 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.15□□□□□ -0.62
SRSF4-204ENST00000489898 CACNA1DQ01668 2161 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 NOTCH2Q04721 2471 aa11.15□□□□□ -0.62
SRSF4-204ENST00000489898 ZNF469Q96JG9 3925 aaPredicted RBP11.15□□□□□ -0.63
SRSF4-204ENST00000489898 VPS13CQ709C8 3753 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 NSG1A0A0A6YYJ2 146 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 TCRBV9S1A1TA0A576 114 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 HMX2A2RU54 273 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 EFCAB8A8MWE9 144 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 TAPBPO15533 448 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 VPS4BO75351 444 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 CCND1P24385 295 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 HRH2P25021 359 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 XCR1P46094 333 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms