RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 SERPINA7P05543 415 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 CELA2AP08217 269 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 SLC35G6P0C7Q6 338 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 CCR8P51685 355 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 ZNF460Q14592 562 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 ZNF169Q14929 603 aaPredicted RBP21.77■■□□□ 1.08
COL9A3-213ENST00000489045 PCOLCEQ15113 449 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 ABHD11Q8NFV4 315 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 PRR7Q8TB68 274 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 LMF1Q96S06 567 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 FAM129AQ9BZQ8 928 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 VN1R1Q9GZP7 353 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 ZNF700Q9H0M5 742 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 ANKHQ9HCJ1 492 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 PTGFRNQ9P2B2 879 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 ICE1Q9Y2F5 2266 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 SCN2AQ99250 2005 aa21.77■■□□□ 1.07
COL9A3-213ENST00000489045 NDC80O14777 642 aa21.76■■□□□ 1.07
COL9A3-213ENST00000489045 CBX6O95503 412 aa21.76■■□□□ 1.07
COL9A3-213ENST00000489045 C8orf89P0DMQ9 161 aa21.76■■□□□ 1.07
COL9A3-213ENST00000489045 GP1BBP13224 206 aa21.76■■□□□ 1.07
COL9A3-213ENST00000489045 SOX11P35716 441 aa21.76■■□□□ 1.07
COL9A3-213ENST00000489045 PPP1R3AQ16821 1122 aa21.76■■□□□ 1.07
COL9A3-213ENST00000489045 MINDY4Q4G0A6 757 aa21.76■■□□□ 1.07
COL9A3-213ENST00000489045 MFSD4BQ5TF39 518 aa21.76■■□□□ 1.07
COL9A3-213ENST00000489045 CAPN12Q6ZSI9 719 aa21.76■■□□□ 1.07
COL9A3-213ENST00000489045 PDSS2Q86YH6 399 aa21.76■■□□□ 1.07
COL9A3-213ENST00000489045 SIRT6Q8N6T7 355 aa21.76■■□□□ 1.07
COL9A3-213ENST00000489045 OR4K1Q8NGD4 311 aa21.76■■□□□ 1.07
COL9A3-213ENST00000489045 OR51Q1Q8NH59 317 aa21.76■■□□□ 1.07
COL9A3-213ENST00000489045 PSMF1Q92530 271 aa21.76■■□□□ 1.07
COL9A3-213ENST00000489045 BARD1Q99728 777 aaKnown RBP21.76■■□□□ 1.07
COL9A3-213ENST00000489045 DPH5Q9H2P9 285 aa21.76■■□□□ 1.07
COL9A3-213ENST00000489045 LRRC4CQ9HCJ2 640 aa21.76■■□□□ 1.07
COL9A3-213ENST00000489045 NPEPPSL1A6NEC2 478 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 CDC7O00311 574 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 OR1F1O43749 312 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 RDH16O75452 317 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 TSFMP43897 325 aaKnown RBP21.75■■□□□ 1.07
COL9A3-213ENST00000489045 XCR1P46094 333 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 TAS2R39P59534 338 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 CDC16Q13042 620 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 CBLBQ13191 982 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 TLR1Q15399 786 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 CATSPEREQ5SY80 951 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 B3GNTL1Q67FW5 361 aaPredicted RBP21.75■■□□□ 1.07
COL9A3-213ENST00000489045 RIPOR1Q6ZS17 1223 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 NKAPQ8N5F7 415 aaKnown RBP21.75■■□□□ 1.07
COL9A3-213ENST00000489045 AMER2Q8N7J2 671 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 BBOF1Q8ND07 529 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 SSC4DQ8WTU2 575 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 METTL21AQ8WXB1 218 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 NEIL2Q969S2 332 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 SARGQ9BW04 601 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 AGPAT4Q9NRZ5 378 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 NSMCE4AQ9NXX6 385 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 NAALAD2Q9Y3Q0 740 aa21.75■■□□□ 1.07
COL9A3-213ENST00000489045 TRBC2A0A5B9 178 aa21.74■■□□□ 1.07
COL9A3-213ENST00000489045 NDUFS4O43181 175 aa21.74■■□□□ 1.07
COL9A3-213ENST00000489045 PIAS1O75925 651 aa21.74■■□□□ 1.07
COL9A3-213ENST00000489045 UQCRHP07919 91 aa21.74■■□□□ 1.07
COL9A3-213ENST00000489045 LANCL3Q6ZV70 420 aa21.74■■□□□ 1.07
COL9A3-213ENST00000489045 ZNF740Q8NDX6 193 aa21.74■■□□□ 1.07
COL9A3-213ENST00000489045 CATSPER1Q8NEC5 780 aa21.74■■□□□ 1.07
COL9A3-213ENST00000489045 SLC5A11Q8WWX8 675 aa21.74■■□□□ 1.07
COL9A3-213ENST00000489045 MOCOSQ96EN8 888 aa21.74■■□□□ 1.07
COL9A3-213ENST00000489045 TSNARE1Q96NA8 513 aa21.74■■□□□ 1.07
COL9A3-213ENST00000489045 SPNS1Q9H2V7 528 aa21.74■■□□□ 1.07
COL9A3-213ENST00000489045 RHOJQ9H4E5 214 aa21.74■■□□□ 1.07
COL9A3-213ENST00000489045 SMYD2Q9NRG4 433 aa21.74■■□□□ 1.07
COL9A3-213ENST00000489045 SLC22A7Q9Y694 548 aa21.74■■□□□ 1.07
COL9A3-213ENST00000489045 ANKUB1A6NFN9 424 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 FAM187AA6NFU0 413 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 ZNF860A6NHJ4 632 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 WFS1O76024 890 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 CYC1P08574 325 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 RNF224P0DH78 156 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 ITGAMP11215 1152 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 ARG2P78540 354 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 C2orf54Q08AI8 447 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 CALCOCO2Q13137 446 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 CSHL1Q14406 222 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 CEP97Q8IW35 865 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 TBC1D19Q8N5T2 526 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 SPATA4Q8NEY3 305 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 PYROXD1Q8WU10 500 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 ANKRD49Q8WVL7 239 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 ANKRD7Q92527 254 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 VPS39Q96JC1 886 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 IMMP1LQ96LU5 166 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 CYTH2Q99418 400 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 ERP44Q9BS26 406 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 MCMBPQ9BTE3 642 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 TUBB6Q9BUF5 446 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 SAYSD1Q9NPB0 183 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 PLA2G3Q9NZ20 509 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 WHRNQ9P202 907 aa21.73■■□□□ 1.07
COL9A3-213ENST00000489045 IGHV3-20A0A0C4DH32 117 aa21.72■■□□□ 1.07
COL9A3-213ENST00000489045 OR2W5A6NFC9 320 aa21.72■■□□□ 1.07
COL9A3-213ENST00000489045 RAD51CO43502 376 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms