RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 VEGFDO43915 354 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 HTRA3P83110 453 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 GANABQ14697 944 aaKnown RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 SBSNQ6UWP8 590 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 ENPP6Q6UWR7 440 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 CEACAM20Q6UY09 585 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 HEATR4Q86WZ0 1026 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 ZNF513Q8N8E2 541 aaPredicted RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 HUS1BQ8NHY5 278 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 FCGR1BQ92637 280 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 HDAC2Q92769 488 aaKnown RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 SLC38A4Q969I6 547 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 TCEAL4Q96EI5 215 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 COL21A1Q96P44 957 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 LIN28AQ9H9Z2 209 aaKnown RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 AMBNQ9NP70 447 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 AGPAT4Q9NRZ5 378 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 STOX2Q9P2F5 926 aaPredicted RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 PCDHB14Q9Y5E9 798 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 PCDHB11Q9Y5F2 797 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 TRBC2A0A5B9 178 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 FAM155AB1AL88 458 aaPredicted RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 NME6O75414 186 aaPredicted RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 C6P13671 934 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 CD9P21926 228 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 MYF6P23409 242 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 VIPR2P41587 438 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 CRISP3P54108 245 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 LRRC32Q14392 662 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 HSF5Q4G112 596 aaPredicted RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 ZNF776Q68DI1 518 aaPredicted RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 CDC73Q6P1J9 531 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 HSD11B1LQ7Z5J1 315 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 DPP10Q8N608 796 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 SHKBP1Q8TBC3 707 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 WFDC5Q8TCV5 224 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 ZNF689Q96CS4 500 aaPredicted RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 CARS2Q9HA77 564 aaKnown RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 ABCB10Q9NRK6 738 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 FBXL12Q9NXK8 326 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 RGPD3A6NKT7 1758 aaPredicted RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 RGPD4Q7Z3J3 1758 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 ARHGEF9O43307 516 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 UGDHO60701 494 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 IMPDH2P12268 514 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 AOAHP28039 575 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 ELK4P28324 431 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 ITGA1P56199 1179 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 RGS8P57771 180 aaPredicted RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 PLEKHM3Q6ZWE6 761 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 LILRA2Q8N149 483 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 BCL7CQ8WUZ0 217 aaPredicted RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 SLC9A6Q92581 669 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 MRPL48Q96GC5 212 aaKnown RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 RIPOR3Q96MK2 946 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 TRMT61BQ9BVS5 477 aaKnown RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 ACPTQ9BZG2 426 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 MAGIXQ9H6Y5 334 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 CALML5Q9NZT1 146 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 ADAM30Q9UKF2 790 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 KCNK6Q9Y257 313 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 POFUT2Q9Y2G5 429 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 PARP14Q460N5 1801 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 LRRC72A6NJI9 287 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 E7EQ34 232 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 ERI3O43414 337 aaKnown RBP11.4□□□□□ -0.58
TRA2B-214ENST00000487615 AIREO43918 545 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 EPCAMP16422 314 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 IGFBP4P22692 258 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 KHKP50053 298 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 NCBP2P52298 156 aaKnown RBP eCLIP11.4□□□□□ -0.58
TRA2B-214ENST00000487615 PPP2R2DQ66LE6 453 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 CCSAPQ6IQ19 270 aaPredicted RBP11.4□□□□□ -0.58
TRA2B-214ENST00000487615 ZNF730Q6ZMV8 503 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 GJD3Q8N144 294 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 SMYD1Q8NB12 490 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 SRMSQ9H3Y6 488 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 EHD3Q9NZN3 535 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 MAP10Q9P2G4 905 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 ITM2BQ9Y287 266 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 SERPINI2O75830 405 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 TXNL4AP83876 142 aaKnown RBP11.4□□□□□ -0.58
TRA2B-214ENST00000487615 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.4□□□□□ -0.58
TRA2B-214ENST00000487615 PDZK1Q5T2W1 519 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 Q6ZSR9 355 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 FAM129CQ86XR2 697 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 MRPL43Q8N983 215 aaKnown RBP11.4□□□□□ -0.58
TRA2B-214ENST00000487615 ZNF420Q8TAQ5 688 aaPredicted RBP11.4□□□□□ -0.58
TRA2B-214ENST00000487615 LKAAEAR1Q8TD35 194 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 SMARCD2Q92925 531 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 KCNC2Q96PR1 638 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 TAS2R9Q9NYW1 312 aa11.4□□□□□ -0.58
TRA2B-214ENST00000487615 CLDN25C9JDP6 229 aa11.4□□□□□ -0.59
TRA2B-214ENST00000487615 BCHEP06276 602 aa11.4□□□□□ -0.59
TRA2B-214ENST00000487615 RETP07949 1114 aa11.4□□□□□ -0.59
TRA2B-214ENST00000487615 SDC1P18827 310 aa11.4□□□□□ -0.59
TRA2B-214ENST00000487615 TALDO1P37837 337 aa11.4□□□□□ -0.59
TRA2B-214ENST00000487615 ACTR1BP42025 376 aa11.4□□□□□ -0.59
TRA2B-214ENST00000487615 ACTR1AP61163 376 aa11.4□□□□□ -0.59
TRA2B-214ENST00000487615 MVKQ03426 396 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms