RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 TMEM178AQ8NBL3 297 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 GPRC5AQ8NFJ5 357 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 OR4C15Q8NGM1 316 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 APOBEC4Q8WW27 367 aaKnown RBP3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 ZNF501Q96CX3 271 aaPredicted RBP3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 RBM41Q96IZ5 413 aaKnown RBP3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 CACNG6Q9BXT2 260 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 ATP13A3Q9H7F0 1226 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 SLC12A6Q9UHW9 1150 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 AGTPBP1Q9UPW5 1226 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 PPP2R2CQ9Y2T4 447 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 ACEP12821 1306 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 COL2A1P02458 1487 aaPredicted RBP3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 A0A087WW49 117 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 C13orf42A0A1B0GVH6 325 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 SNURFLB1AK76 121 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 SLCO1B7G3V0H7 640 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 TEX28O15482 410 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 TTI1O43156 1089 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 SCO2O43819 266 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 NME6O75414 186 aaPredicted RBP3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 KHDRBS3O75525 346 aaKnown RBP3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 CRCPO75575 148 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 GLCEO94923 617 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 SEC24AO95486 1093 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 BAG2O95816 211 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 VTNP04004 478 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 HMBSP08397 361 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 DLATP10515 647 aaKnown RBP3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 UROSP10746 265 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 SLC2A2P11168 524 aaPredicted RBP3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 CEACAM1P13688 526 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 HNF4AP41235 474 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 KHKP50053 298 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 AKAP17AQ02040 695 aaKnown RBP3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 ARHGAP1Q07960 439 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 CETN1Q12798 172 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 SGCGQ13326 291 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 ZNF74Q16587 644 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 FFAR4Q5NUL3 377 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 KLHL10Q6JEL2 608 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 SLC25A47Q6Q0C1 308 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 LEKR1Q6ZMV7 388 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 SLC24A5Q71RS6 500 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 KCTD9Q7L273 389 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 FCRLAQ7L513 359 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 CCDC83Q8IWF9 413 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 AQP12AQ8IXF9 295 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 KLHDC8BQ8IXV7 354 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 LSMEM2Q8N112 164 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 GPC2Q8N158 579 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 GBP7Q8N8V2 638 aaPredicted RBP3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 ZNF485Q8NCK3 441 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 KIAA0895Q8NCT3 520 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 OR5AP2Q8NGF4 316 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 OR10G8Q8NGN5 311 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 FAM76AQ8TAV0 307 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 TMEM190Q8WZ59 177 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 CCDC43Q96MW1 224 aaKnown RBP3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 NKX3-1Q99801 234 aaPredicted RBP3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 C17orf62Q9BQA9 187 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 ALKBH7Q9BT30 221 aaPredicted RBP3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 FSD1Q9BTV5 496 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 NACAP1Q9BZK3 213 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 SLC5A7Q9GZV3 580 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 GPR173Q9NS66 373 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 EXOC1Q9NV70 894 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 TBC1D13Q9NVG8 400 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 INTS10Q9NVR2 710 aaKnown RBP3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 CWC25Q9NXE8 425 aaPredicted RBP3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 EPHA6Q9UF33 1036 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 PRDM4Q9UKN5 801 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 ELF5Q9UKW6 265 aaPredicted RBP3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 GAB2Q9UQC2 676 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 ITM2BQ9Y287 266 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 PFASO15067 1338 aa3.11□□□□□ -1.91
SNRNP27-204ENST00000487029 A0A087WUV0 522 aaPredicted RBP3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 MTMR11A4FU01 709 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 HHLA1C9JL84 531 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 E5RGE8 158 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 H3BMM5 538 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 ATP9AO75110 1047 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 RTN2O75298 545 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 AMBPP02760 352 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 RAF1P04049 648 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 PRKAR1AP10644 381 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 KRT3P12035 628 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 GNB3P16520 340 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 ELAVL4P26378 380 aaKnown RBP3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 RBMS1P29558 406 aaKnown RBP3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 CASP3P42574 277 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 OR3A3P47888 321 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 C17orf67Q0P5P2 114 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 TEFQ10587 303 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 SRSF9Q13242 221 aaKnown RBP eCLIP3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 PTPN14Q15678 1187 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 C2orf76Q3KRA6 126 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 ZNF876PQ49A33 203 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 SLC39A12Q504Y0 691 aa3.1□□□□□ -1.91
SNRNP27-204ENST00000487029 ZNF542PQ5EBM4 170 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms