RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 H2AFJQ9BTM1 129 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.21■■□□□ 1.315e-9■■■■□ 24.5
LIME1-206ENST00000487026 LRRTM2O43300 516 aa23.2■■□□□ 1.3
LIME1-206ENST00000487026 SEC24DO94855 1032 aaPredicted RBP23.2■■□□□ 1.3
LIME1-206ENST00000487026 WDPCPO95876 746 aa23.2■■□□□ 1.3
LIME1-206ENST00000487026 ZNF787Q6DD87 383 aa23.2■■□□□ 1.3
LIME1-206ENST00000487026 TAAR6Q96RI8 345 aa23.2■■□□□ 1.3
LIME1-206ENST00000487026 OLFM1Q99784 485 aa23.2■■□□□ 1.3
LIME1-206ENST00000487026 WDR83Q9BRX9 315 aaKnown RBP23.2■■□□□ 1.3
LIME1-206ENST00000487026 TUBB6Q9BUF5 446 aa23.2■■□□□ 1.3
LIME1-206ENST00000487026 ANKHQ9HCJ1 492 aa23.2■■□□□ 1.3
LIME1-206ENST00000487026 OLAHQ9NV23 265 aa23.2■■□□□ 1.3
LIME1-206ENST00000487026 ARL15Q9NXU5 204 aa23.2■■□□□ 1.3
LIME1-206ENST00000487026 VWA7Q9Y334 891 aa23.2■■□□□ 1.3
LIME1-206ENST00000487026 TRAV17A0A0B4J275 112 aa23.19■■□□□ 1.3
LIME1-206ENST00000487026 RDH16O75452 317 aa23.19■■□□□ 1.3
LIME1-206ENST00000487026 ICAM2P13598 275 aa23.19■■□□□ 1.3
LIME1-206ENST00000487026 CCND1P24385 295 aa23.19■■□□□ 1.3
LIME1-206ENST00000487026 GRK3P35626 688 aa23.19■■□□□ 1.3
LIME1-206ENST00000487026 SRSF11Q05519 484 aaKnown RBP23.19■■□□□ 1.3
LIME1-206ENST00000487026 HIBCHQ6NVY1 386 aaPredicted RBP23.19■■□□□ 1.3
LIME1-206ENST00000487026 CPEB2Q7Z5Q1 589 aaKnown RBP23.19■■□□□ 1.3
LIME1-206ENST00000487026 PDIK1LQ8N165 341 aa23.19■■□□□ 1.3
LIME1-206ENST00000487026 BCORP1Q8N888 145 aa23.19■■□□□ 1.3
LIME1-206ENST00000487026 MFSD9Q8NBP5 474 aa23.19■■□□□ 1.3
LIME1-206ENST00000487026 MOCOSQ96EN8 888 aa23.19■■□□□ 1.3
LIME1-206ENST00000487026 SNF8Q96H20 258 aa23.19■■□□□ 1.3
LIME1-206ENST00000487026 SLX1AQ9BQ83 275 aa23.19■■□□□ 1.3
LIME1-206ENST00000487026 GRPEL1Q9HAV7 217 aa23.19■■□□□ 1.3
LIME1-206ENST00000487026 STMN3Q9NZ72 180 aa23.19■■□□□ 1.3
LIME1-206ENST00000487026 IKZF3Q9UKT9 509 aa23.19■■□□□ 1.3
LIME1-206ENST00000487026 NAALAD2Q9Y3Q0 740 aa23.19■■□□□ 1.3
LIME1-206ENST00000487026 ZGRF1Q86YA3 2104 aa23.18■■□□□ 1.3
LIME1-206ENST00000487026 ZNF860A6NHJ4 632 aa23.18■■□□□ 1.3
LIME1-206ENST00000487026 USP27XA6NNY8 438 aa23.18■■□□□ 1.3
LIME1-206ENST00000487026 A8MUI8 341 aa23.18■■□□□ 1.3
LIME1-206ENST00000487026 GUCA1CO95843 209 aa23.18■■□□□ 1.3
LIME1-206ENST00000487026 TCP1P17987 556 aaKnown RBP23.18■■□□□ 1.3
LIME1-206ENST00000487026 DUPD1Q68J44 220 aa23.18■■□□□ 1.3
LIME1-206ENST00000487026 ANKRD37Q7Z713 158 aa23.18■■□□□ 1.3
LIME1-206ENST00000487026 OR4K3Q96R72 315 aa23.18■■□□□ 1.3
LIME1-206ENST00000487026 HAUS8Q9BT25 410 aa23.18■■□□□ 1.3
LIME1-206ENST00000487026 OR1F1O43749 312 aa23.17■■□□□ 1.3
LIME1-206ENST00000487026 CCR8P51685 355 aa23.17■■□□□ 1.3
LIME1-206ENST00000487026 ZNF33BQ06732 778 aa23.17■■□□□ 1.3
LIME1-206ENST00000487026 MORF4L2Q15014 288 aa23.17■■□□□ 1.3
LIME1-206ENST00000487026 BTBD16Q32M84 506 aa23.17■■□□□ 1.3
LIME1-206ENST00000487026 ABHD17BQ5VST6 288 aa23.17■■□□□ 1.3
LIME1-206ENST00000487026 GALNT7Q86SF2 657 aa23.17■■□□□ 1.3
LIME1-206ENST00000487026 ANKMY2Q8IV38 441 aa23.17■■□□□ 1.3
LIME1-206ENST00000487026 ZNF740Q8NDX6 193 aa23.17■■□□□ 1.3
LIME1-206ENST00000487026 OR5T3Q8NGG3 340 aa23.17■■□□□ 1.3
LIME1-206ENST00000487026 OR56A3Q8NH54 315 aa23.17■■□□□ 1.3
LIME1-206ENST00000487026 TRIM51Q9BSJ1 452 aa23.17■■□□□ 1.3
LIME1-206ENST00000487026 RBCK1Q9BYM8 510 aa23.17■■□□□ 1.3
LIME1-206ENST00000487026 TRIM54Q9BYV2 358 aa23.17■■□□□ 1.3
LIME1-206ENST00000487026 TEX264Q9Y6I9 313 aa23.17■■□□□ 1.3
LIME1-206ENST00000487026 PABPN1LA6NDY0 278 aaKnown RBP23.16■■□□□ 1.3
LIME1-206ENST00000487026 DNAJB6O75190 326 aa23.16■■□□□ 1.3
LIME1-206ENST00000487026 CDC123O75794 336 aaPredicted RBP23.16■■□□□ 1.3
LIME1-206ENST00000487026 B3GALT4O96024 378 aa23.16■■□□□ 1.3
LIME1-206ENST00000487026 SERPIND1P05546 499 aa23.16■■□□□ 1.3
LIME1-206ENST00000487026 SAT1P21673 171 aa23.16■■□□□ 1.3
LIME1-206ENST00000487026 ST13P50502 369 aaKnown RBP23.16■■□□□ 1.3
LIME1-206ENST00000487026 DR1Q01658 176 aa23.16■■□□□ 1.3
LIME1-206ENST00000487026 CATSPEREQ5SY80 951 aa23.16■■□□□ 1.3
LIME1-206ENST00000487026 ZNF324BQ6AW86 544 aaPredicted RBP23.16■■□□□ 1.3
LIME1-206ENST00000487026 FCRLBQ6BAA4 426 aa23.16■■□□□ 1.3
LIME1-206ENST00000487026 TMEM207Q6UWW9 146 aa23.16■■□□□ 1.3
LIME1-206ENST00000487026 CREG2Q8IUH2 290 aa23.16■■□□□ 1.3
LIME1-206ENST00000487026 ABHD11Q8NFV4 315 aa23.16■■□□□ 1.3
LIME1-206ENST00000487026 OR4K1Q8NGD4 311 aa23.16■■□□□ 1.3
LIME1-206ENST00000487026 PEX11GQ96HA9 241 aa23.16■■□□□ 1.3
LIME1-206ENST00000487026 SPNS1Q9H2V7 528 aa23.16■■□□□ 1.3
LIME1-206ENST00000487026 C19orf25Q9UFG5 118 aaPredicted RBP23.16■■□□□ 1.3
LIME1-206ENST00000487026 SLC22A7Q9Y694 548 aa23.16■■□□□ 1.3
LIME1-206ENST00000487026 DIDO1Q9BTC0 2240 aaKnown RBP23.16■■□□□ 1.3
LIME1-206ENST00000487026 NDUFS4O43181 175 aa23.15■■□□□ 1.3
LIME1-206ENST00000487026 SLC35G6P0C7Q6 338 aa23.15■■□□□ 1.3
LIME1-206ENST00000487026 DCTP40126 519 aa23.15■■□□□ 1.3
LIME1-206ENST00000487026 ITGA8P53708 1063 aa23.15■■□□□ 1.3
LIME1-206ENST00000487026 AP1S2P56377 157 aa23.15■■□□□ 1.3
LIME1-206ENST00000487026 KCNK10P57789 538 aa23.15■■□□□ 1.3
LIME1-206ENST00000487026 AP2B1P63010 937 aa23.15■■□□□ 1.3
LIME1-206ENST00000487026 STEAP4Q687X5 459 aa23.15■■□□□ 1.3
LIME1-206ENST00000487026 FAM45BPQ6NSW5 357 aa23.15■■□□□ 1.3
LIME1-206ENST00000487026 FAM45AQ8TCE6 357 aa23.15■■□□□ 1.3
LIME1-206ENST00000487026 FBXL8Q96CD0 374 aa23.15■■□□□ 1.3
LIME1-206ENST00000487026 TSNARE1Q96NA8 513 aa23.15■■□□□ 1.3
LIME1-206ENST00000487026 TRIM31Q9BZY9 425 aa23.15■■□□□ 1.3
LIME1-206ENST00000487026 PSAT1Q9Y617 370 aa23.15■■□□□ 1.3
LIME1-206ENST00000487026 ITPR2Q14571 2701 aa23.15■■□□□ 1.3
LIME1-206ENST00000487026 CELSR2Q9HCU4 2923 aa23.14■■□□□ 1.3
LIME1-206ENST00000487026 CPAMD8Q8IZJ3 1885 aa23.14■■□□□ 1.29
LIME1-206ENST00000487026 OR5H15A6NDH6 313 aa23.14■■□□□ 1.29
LIME1-206ENST00000487026 TTI1O43156 1089 aa23.14■■□□□ 1.29
LIME1-206ENST00000487026 TDGF1P3P51864 188 aa23.14■■□□□ 1.29
LIME1-206ENST00000487026 OLR1P78380 273 aa23.14■■□□□ 1.29
LIME1-206ENST00000487026 PLAG1Q6DJT9 500 aa23.14■■□□□ 1.29
LIME1-206ENST00000487026 SYDE1Q6ZW31 735 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms