RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 DPM1O60762 260 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 ABCB1P08183 1280 aaPredicted RBP11.88□□□□□ -0.51
PTCD2-204ENST00000486995 ACRP10323 421 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 ZNF12P17014 697 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 EPHA5P54756 1037 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 RPS13P62277 151 aaKnown RBP11.88□□□□□ -0.51
PTCD2-204ENST00000486995 GRIN2CQ14957 1233 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 MAD2L1BPQ15013 274 aaPredicted RBP11.88□□□□□ -0.51
PTCD2-204ENST00000486995 ZNF658BQ4V348 819 aaPredicted RBP11.88□□□□□ -0.51
PTCD2-204ENST00000486995 KIAA1614Q5VZ46 1190 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 LIPIQ6XZB0 460 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 TSEN54Q7Z6J9 526 aaKnown RBP11.88□□□□□ -0.51
PTCD2-204ENST00000486995 NPAS3Q8IXF0 933 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 NAGSQ8N159 534 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 ZNF557Q8N988 423 aaPredicted RBP11.88□□□□□ -0.51
PTCD2-204ENST00000486995 ATG16L2Q8NAA4 619 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 VPS37AQ8NEZ2 397 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 RORBQ92753 470 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 UBE2FQ969M7 185 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 AP2M1Q96CW1 435 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 APOL4Q9BPW4 351 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 SPATA9Q9BWV2 254 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 PALMDQ9NP74 551 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 KRT84Q9NSB2 600 aa11.88□□□□□ -0.51
PTCD2-204ENST00000486995 DNAAF2Q9NVR5 837 aaKnown RBP11.88□□□□□ -0.51
PTCD2-204ENST00000486995 HELZP42694 1942 aaKnown RBP11.87□□□□□ -0.51
PTCD2-204ENST00000486995 HIDE1A8MVS5 230 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 GABARAPO95166 117 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 NTRK1P04629 796 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 CLTBP09497 229 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 XPAP23025 273 aaPredicted RBP11.87□□□□□ -0.51
PTCD2-204ENST00000486995 AQP1P29972 269 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 TIA1P31483 386 aaKnown RBP eCLIP11.87□□□□□ -0.51
PTCD2-204ENST00000486995 MMP12P39900 470 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 MASP1P48740 699 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 ERVFC1P60507 584 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 ZNF77Q15935 545 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 SPIN4Q56A73 249 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.87□□□□□ -0.51
PTCD2-204ENST00000486995 ANXA8L1Q5VT79 327 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 DCDC5Q6ZRR9 648 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 NLRP8Q86W28 1048 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 SNRNP27Q8WVK2 155 aaKnown RBP11.87□□□□□ -0.51
PTCD2-204ENST00000486995 GPATCH2Q9NW75 528 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 SCN3BQ9NY72 215 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 SH3BP4Q9P0V3 963 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 DKK3Q9UBP4 350 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 ITM2BQ9Y287 266 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 WNT6Q9Y6F9 365 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 KCNE2Q9Y6J6 123 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 MGAT4DA6NG13 374 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 RNASET2O00584 256 aaKnown RBP11.87□□□□□ -0.51
PTCD2-204ENST00000486995 SUV39H1O43463 412 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 PCDH7O60245 1069 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 C1orf105O95561 183 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 C9P02748 559 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 DDX6P26196 483 aaKnown RBP eCLIP11.87□□□□□ -0.51
PTCD2-204ENST00000486995 PBLDP30039 288 aaPredicted RBP11.87□□□□□ -0.51
PTCD2-204ENST00000486995 WEE1P30291 646 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 NNMTP40261 264 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 MVDP53602 400 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 RPP38P78345 283 aaKnown RBP11.87□□□□□ -0.51
PTCD2-204ENST00000486995 NPRL3Q12980 569 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 ZNF385BQ569K4 471 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 CATSPEREQ5SY80 951 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 SYT6Q5T7P8 510 aaPredicted RBP11.87□□□□□ -0.51
PTCD2-204ENST00000486995 ZNF366Q8N895 744 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.87□□□□□ -0.51
PTCD2-204ENST00000486995 ZNF480Q8WV37 535 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 YIPF6Q96EC8 236 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 KIF17Q9P2E2 1029 aa11.87□□□□□ -0.51
PTCD2-204ENST00000486995 GNG14A0A1W2PPG7 69 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 WBP4O75554 376 aaKnown RBP11.86□□□□□ -0.51
PTCD2-204ENST00000486995 MT-ND2P03891 347 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 ELFN1P0C7U0 828 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 NPPBP16860 134 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 ZNF8P17098 575 aaPredicted RBP11.86□□□□□ -0.51
PTCD2-204ENST00000486995 PPIBP23284 216 aaKnown RBP11.86□□□□□ -0.51
PTCD2-204ENST00000486995 PCGF2P35227 344 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 HPCAL1P37235 193 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 OPRL1P41146 370 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 NR1D2Q14995 579 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 ADPRMQ3LIE5 342 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 MED27Q6P2C8 311 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 OTOP2Q7RTS6 562 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 TMPRSS11BQ86T26 416 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 ZNF554Q86TJ5 538 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 FAM124AQ86V42 546 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 PARP8Q8N3A8 854 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 ZNF540Q8NDQ6 660 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 OR4A15Q8NGL6 344 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 SH3YL1Q96HL8 342 aaPredicted RBP11.86□□□□□ -0.51
PTCD2-204ENST00000486995 COX4I2Q96KJ9 171 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 ZSWIM3Q96MP5 696 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 FOPNLQ96NB1 174 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 FAM210AQ96ND0 272 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 EPYCQ99645 322 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 PITX2Q99697 317 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 TCF25Q9BQ70 676 aa11.86□□□□□ -0.51
PTCD2-204ENST00000486995 DOHHQ9BU89 302 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms