RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 KIAA1024LP59773 190 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 SRP54P61011 504 aaKnown RBP3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 RHOAP61586 193 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 GPS1Q13098 491 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 IRF4Q15306 451 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 TGIF1Q15583 401 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 CLPPQ16740 277 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 UGP2Q16851 508 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 TPD52L1Q16890 204 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 C15orf59Q2T9L4 293 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 RAB6CQ53S08 254 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 C2CD6Q53TS8 623 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 LRRC73Q5JTD7 316 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 FAM72AQ5TYM5 149 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 TAF3Q5VWG9 929 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 NAA35Q5VZE5 725 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 FAM72DQ6L9T8 149 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 CCDC144NLQ6NUI1 221 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 ERAP2Q6P179 960 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 BRAT1Q6PJG6 821 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 LEKR1Q6ZMV7 388 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 FAM72BQ86X60 149 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 DNAAF5Q86Y56 855 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 UMODL1-AS1Q8N2C9 162 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 EMC1Q8N766 993 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 PRR26Q8N8Z3 221 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 MLKLQ8NB16 471 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 GPT2Q8TD30 523 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 GLMPQ8WWB7 406 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 RXFP2Q8WXD0 754 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 TSACCQ96A04 125 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 NTAN1Q96AB6 310 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 TBC1D31Q96DN5 1066 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 ZNF641Q96N77 438 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 CMKLR1Q99788 373 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 TUBGCP2Q9BSJ2 902 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 WRAP53Q9BUR4 548 aaKnown RBP3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 STK33Q9BYT3 514 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 MAGEB5Q9BZ81 275 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 RAB6CQ9H0N0 254 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 SYNDIG1Q9H7V2 258 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 ZBTB26Q9HCK0 441 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 HEYLQ9NQ87 328 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 GEMIN8Q9NWZ8 242 aaKnown RBP3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 KLQ9UEF7 1012 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 PISDQ9UG56 409 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 NEU3Q9UQ49 428 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 DAAM1Q9Y4D1 1078 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 LOXL2Q9Y4K0 774 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 ICE1Q9Y2F5 2266 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 NOTCH2Q04721 2471 aa3.92□□□□□ -1.78
SNRNP40-205ENST00000486941 BOD1L1Q8NFC6 3051 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 OR2W5A6NFC9 320 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 TMEM202A6NGA9 273 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 RASA4BC9J798 803 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 INAFM1C9JVW0 142 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 F8VZ95 297 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 CACNB4O00305 520 aaPredicted RBP3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 ZW10O43264 779 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 RASA4O43374 803 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 B4GAT1O43505 415 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 PPP1R3DO95685 299 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 CPNE6O95741 557 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 KRT3P12035 628 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 KRT10P13645 584 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 CHRNB2P17787 502 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 ITIH1P19827 911 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 MATN1P21941 496 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 RFC1P35251 1148 aaPredicted RBP3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 MMP12P39900 470 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 STAT1P42224 750 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 AIF1P55008 147 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 HDAC4P56524 1084 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 GSCP56915 257 aaPredicted RBP3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 DSCR9P59020 149 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 POLR2LP62875 67 aaKnown RBP3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 CDR2Q01850 454 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 NSUN2Q08J23 767 aaKnown RBP eCLIP3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 SRSF6Q13247 344 aaKnown RBP3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 BECN1Q14457 450 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 HLTFQ14527 1009 aaKnown RBP eCLIP3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 CYTH1Q15438 398 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 CDO1Q16878 200 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 ANXA2RQ3ZCQ2 193 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 PARP15Q460N3 678 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 C14orf28Q4W4Y0 310 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 WASHC2DQ5SRD0 308 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 HMBOX1Q6NT76 420 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 WDR59Q6PJI9 974 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 TAF8Q7Z7C8 310 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 SLFN11Q7Z7L1 901 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 SRLQ86TD4 932 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 NR2C2APQ86WQ0 139 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 C17orf82Q86X59 251 aaPredicted RBP3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 ZFAND4Q86XD8 727 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 ZNF354CQ86Y25 554 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 CAMK1DQ8IU85 385 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 CCDC28AQ8IWP9 274 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 CCDC185Q8N715 623 aa3.91□□□□□ -1.78
SNRNP40-205ENST00000486941 RNF152Q8N8N0 203 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms