RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 PELI3Q8N2H9 469 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 NXPE1Q8N323 547 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 FBXW8Q8N3Y1 598 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 ARFGAP2Q8N6H7 521 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 OR6S1Q8NH40 331 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 GPT2Q8TD30 523 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 FAM172AQ8WUF8 416 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 THAP4Q8WY91 577 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 HDAC10Q969S8 669 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 FAM162AQ96A26 154 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 FAM120BQ96EK7 910 aaKnown RBP6.58□□□□□ -1.36
HDAC3-209ENST00000486618 DTD2Q96FN9 168 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 MAGEB10Q96LZ2 347 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-209ENST00000486618 FAM111AQ96PZ2 611 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 DMRTA2Q96SC8 542 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 CCDC77Q9BR77 488 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 SLC25A23Q9BV35 468 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 RAB6CQ9H0N0 254 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 ABCG8Q9H221 673 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 LRRC19Q9H756 370 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 SP110Q9HB58 689 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 PDFQ9HBH1 243 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 EMC7Q9NPA0 242 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 SIX2Q9NPC8 291 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 OBP2BQ9NPH6 170 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 SLAMF7Q9NQ25 335 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 CNOT8Q9UFF9 292 aaKnown RBP6.58□□□□□ -1.36
HDAC3-209ENST00000486618 KLHL3Q9UH77 587 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 PADI1Q9ULC6 663 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 CFL2Q9Y281 166 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 CCL27Q9Y4X3 112 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 CLDN16Q9Y5I7 305 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 POLEQ07864 2286 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 SEC16AO15027 2179 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 F8P00451 2351 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 KIR2DS5A0A0G2JLQ3 304 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 A0A0G2JNG1 304 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 WIPF3A6NGB9 483 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 OR5K4A6NMS3 321 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 LGALS16A8MUM7 142 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 A8MXE2 369 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 TCP11X1B4DZS4 312 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 C21orf140B9A014 251 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 KIR2DS3K7RE56 304 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 TRAFD1O14545 582 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-209ENST00000486618 TO15178 435 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 TOX3O15405 576 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-209ENST00000486618 CD3EAPO15446 510 aaKnown RBP6.57□□□□□ -1.36
HDAC3-209ENST00000486618 CYTIPO60759 359 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 DPM1O60762 260 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 SORBS2O94875 1100 aaKnown RBP6.57□□□□□ -1.36
HDAC3-209ENST00000486618 HEXIM1O94992 359 aaKnown RBP6.57□□□□□ -1.36
HDAC3-209ENST00000486618 NDUFA10O95299 355 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 MLYCDO95822 493 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 PRR35P0CG20 571 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 RNF224P0DH78 156 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 GPD1P21695 349 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 MMP8P22894 467 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 PTBP1P26599 531 aaKnown RBP eCLIP6.57□□□□□ -1.36
HDAC3-209ENST00000486618 WNT5AP41221 380 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 RGRP47804 291 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 LEPRP48357 1165 aaKnown RBP6.57□□□□□ -1.36
HDAC3-209ENST00000486618 ZNF81P51508 661 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 PRRX1P54821 245 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 TPI1P60174 286 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 OTUD4Q01804 1114 aaKnown RBP6.57□□□□□ -1.36
HDAC3-209ENST00000486618 TAP2Q03519 686 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 DPTQ07507 201 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 CHIT1Q13231 466 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 NFATC2Q13469 925 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 DNASE1L3Q13609 305 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 CRYMQ14894 314 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 KIR2DS5Q14953 304 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 AANATQ16613 207 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 NADK2Q4G0N4 442 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 KCTD21Q4G0X4 260 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 ANO6Q4KMQ2 910 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 LRRC23Q53EV4 343 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-209ENST00000486618 TEX35Q5T0J7 233 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 ZNF648Q5T619 568 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-209ENST00000486618 TMEM53Q6P2H8 277 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 MTFR2Q6P444 385 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 Q6ZVL8 140 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 STX12Q86Y82 276 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 PHC2Q8IXK0 858 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 SRRM1Q8IYB3 904 aaKnown RBP6.57□□□□□ -1.36
HDAC3-209ENST00000486618 CARFQ8N187 725 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 PYROXD2Q8N2H3 581 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 DNAJB8Q8NHS0 232 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 CLHC1Q8NHS4 586 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 JOSD2Q8TAC2 188 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 PDCD6IPQ8WUM4 868 aaKnown RBP6.57□□□□□ -1.36
HDAC3-209ENST00000486618 SYN2Q92777 582 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-209ENST00000486618 VPS33AQ96AX1 596 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 MVB12AQ96EY5 273 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 SLC47A1Q96FL8 570 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 C5orf34Q96MH7 638 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 RAB3IPQ96QF0 476 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-209ENST00000486618 NDST4Q9H3R1 872 aa6.57□□□□□ -1.36
HDAC3-209ENST00000486618 SCPEP1Q9HB40 452 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms