RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 SPNS1Q9H2V7 528 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 CCDC86Q9H6F5 360 aaKnown RBP10.88□□□□□ -0.67
NUP50-216ENST00000486184 NT5DC2Q9H857 520 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 MLXIPLQ9NP71 852 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 ASCL3Q9NQ33 180 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 ACSS2Q9NR19 701 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 STARD5Q9NSY2 213 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 FOXJ2Q9P0K8 574 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 ZFP69BQ9UJL9 534 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 PCDHB3Q9Y5E6 796 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 PCDHGA11Q9Y5H2 935 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 SPTBP11277 2137 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 HYKKA2RU49 373 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 CDRT15L2A8MXV6 281 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 H3BQF6 201 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 OR7A17O14581 309 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 LCMT2O60294 686 aaKnown RBP10.87□□□□□ -0.67
NUP50-216ENST00000486184 WFS1O76024 890 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 STATHP02808 62 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 NTRK1P04629 796 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 KLK3P07288 261 aaPredicted RBP10.87□□□□□ -0.67
NUP50-216ENST00000486184 ALAS2P22557 587 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 HMOX2P30519 316 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 ETV4P43268 484 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 ATP1A2P50993 1020 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 SLC18A1P54219 525 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 PKNOX1P55347 436 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 PCBP4P57723 403 aaKnown RBP10.87□□□□□ -0.67
NUP50-216ENST00000486184 STXBP1P61764 594 aaKnown RBP10.87□□□□□ -0.67
NUP50-216ENST00000486184 FOXK2Q01167 660 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 PCDH1Q08174 1060 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 IFT88Q13099 833 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 PWP1Q13610 501 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 DDX39BQ13838 428 aaKnown RBP10.87□□□□□ -0.67
NUP50-216ENST00000486184 CPSF6Q16630 551 aaKnown RBP eCLIP10.87□□□□□ -0.67
NUP50-216ENST00000486184 MUM1Q2TAK8 710 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 HKDC1Q2TB90 917 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 TBC1D25Q3MII6 688 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 C6orf15Q6UXA7 325 aaPredicted RBP10.87□□□□□ -0.67
NUP50-216ENST00000486184 TTLL10Q6ZVT0 673 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.87□□□□□ -0.67
NUP50-216ENST00000486184 L3MBTL4Q8NA19 623 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 OR4F6Q8NGB9 312 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 RNF31Q96EP0 1072 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 SEC16BQ96JE7 1060 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 CNDP1Q96KN2 507 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 CDK15Q96Q40 435 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 ZNF382Q96SR6 550 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 TRMOQ9BU70 441 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 GSTO2Q9H4Y5 243 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 ELOVL6Q9H5J4 265 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 EML4Q9HC35 981 aaKnown RBP10.87□□□□□ -0.67
NUP50-216ENST00000486184 ZBTB26Q9HCK0 441 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 MID1IP1Q9NPA3 183 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 MED4Q9NPJ6 270 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 CUTCQ9NTM9 273 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 TRPS1Q9UHF7 1281 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 ADGRE2Q9UHX3 823 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 SNX6Q9UNH7 406 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 RUVBL1Q9Y265 456 aaKnown RBP10.87□□□□□ -0.67
NUP50-216ENST00000486184 RNF11Q9Y3C5 154 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 SCN3AQ9NY46 2000 aa10.87□□□□□ -0.67
NUP50-216ENST00000486184 FITM1A5D6W6 292 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 P2RX6O15547 441 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 NPHS1O60500 1241 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 OR4F21O95013 312 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 TIAF1O95411 115 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 ENO1P06733 434 aaKnown RBP10.86□□□□□ -0.67
NUP50-216ENST00000486184 CD22P20273 847 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 AGXTP21549 392 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 SERPINB5P36952 375 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 EMP3P54852 163 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 PPP2R2AP63151 447 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 SKP1P63208 163 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 TGM3Q08188 693 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 TRAF3Q13114 568 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 E2F2Q14209 437 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 RCN2Q14257 317 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 ZRSR2Q15696 482 aaKnown RBP10.86□□□□□ -0.67
NUP50-216ENST00000486184 CHI3L2Q15782 390 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 GGTA1PQ4G0N0 100 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 MANEAQ5SRI9 462 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 C10orf62Q5T681 223 aaPredicted RBP10.86□□□□□ -0.67
NUP50-216ENST00000486184 GARNL3Q5VVW2 1013 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 ZCCHC23Q6ZST2 131 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 ABHD13Q7L211 337 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 VN1R4Q7Z5H5 301 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 ZFAND4Q86XD8 727 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 TRIM42Q8IWZ5 723 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 HOMEZQ8IX15 550 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 NLGN4XQ8N0W4 816 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 ESX1Q8N693 406 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 CDYL2Q8N8U2 506 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 ANKRD53Q8N9V6 530 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 GALNT6Q8NCL4 622 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 NLGN4YQ8NFZ3 816 aaPredicted RBP10.86□□□□□ -0.67
NUP50-216ENST00000486184 ZCCHC10Q8TBK6 192 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 MDM1Q8TC05 714 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 NT5CQ8TCD5 201 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 DYDC1Q8WWB3 177 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms