RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 NSL1Q96IY1 281 aa4.05□□□□□ -1.76
SMARCC1-207ENST00000485833 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
SMARCC1-207ENST00000485833 TRAF4Q9BUZ4 470 aaPredicted RBP4.05□□□□□ -1.76
SMARCC1-207ENST00000485833 RTN4RQ9BZR6 473 aa4.05□□□□□ -1.76
SMARCC1-207ENST00000485833 SMARCAD1Q9H4L7 1026 aa4.05□□□□□ -1.76
SMARCC1-207ENST00000485833 POMKQ9H5K3 350 aa4.05□□□□□ -1.76
SMARCC1-207ENST00000485833 CHMP1AQ9HD42 196 aaPredicted RBP4.05□□□□□ -1.76
SMARCC1-207ENST00000485833 ACKR4Q9NPB9 350 aa4.05□□□□□ -1.76
SMARCC1-207ENST00000485833 CYP39A1Q9NYL5 469 aa4.05□□□□□ -1.76
SMARCC1-207ENST00000485833 TNNQ9UQP3 1299 aa4.05□□□□□ -1.76
SMARCC1-207ENST00000485833 Q9Y3F1 56 aa4.05□□□□□ -1.76
SMARCC1-207ENST00000485833 LAMA5O15230 3695 aa4.05□□□□□ -1.76
SMARCC1-207ENST00000485833 CFAP46Q8IYW2 2715 aa4.05□□□□□ -1.76
SMARCC1-207ENST00000485833 ADGRA3Q8IWK6 1321 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 A0A1W2PN81 502 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 F5H6K3 240 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 SSX4O60224 188 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 RAF1P04049 648 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 UQCRFS1P1P0C7P4 283 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 SP9P0CG40 484 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 AOC1P19801 751 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 TYMPP19971 482 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 CHRNA7P36544 502 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 PSMB10P40306 273 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 SUOXP51687 545 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 MFAP4P55083 255 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 KLRC3Q07444 240 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 ARHGAP1Q07960 439 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 IRF3Q14653 427 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 TAF13Q15543 124 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 DCAF10Q5QP82 559 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 FAAP20Q6NZ36 180 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 GTSCR1Q86UQ5 136 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 MAML2Q8IZL2 1156 aaPredicted RBP4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 PPFIBP2Q8ND30 876 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 C1orf131Q8NDD1 294 aaKnown RBP4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 OR2T6Q8NHC8 308 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 GRHL3Q8TE85 626 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 MCRIP2Q9BUT9 160 aaKnown RBP4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 PPIL3Q9H2H8 161 aaKnown RBP4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 PLCXD1Q9NUJ7 323 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 RHCGQ9UBD6 479 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 OSGIN1Q9UJX0 560 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 SDK1Q7Z5N4 2213 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 DOCK8Q8NF50 2099 aa4.04□□□□□ -1.76
SMARCC1-207ENST00000485833 MYH7P12883 1935 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 USP9XQ93008 2570 aaPredicted RBP4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 A0A0J9YWU9 116 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 ASB14A6NK59 587 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 PTGES3LE9PB15 166 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 CRLF1O75462 422 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 ZFAND5O76080 213 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 PIGNO95427 931 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 DCNP07585 359 aaKnown RBP4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 GLULP15104 373 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 CEBPBP17676 345 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 EFNA1P20827 205 aaPredicted RBP4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 CX3CL1P78423 397 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 BAATQ14032 418 aaPredicted RBP4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 SPECC1Q5M775 1068 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 CHST3Q7LGC8 479 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 TBC1D1Q86TI0 1168 aaPredicted RBP4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 OLIG1Q8TAK6 271 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 ANKRD9Q96BM1 317 aaPredicted RBP4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 OR6C1Q96RD1 312 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 ATOH8Q96SQ7 321 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 C16orf70Q9BSU1 422 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 VN1R1Q9GZP7 353 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 LARSQ9P2J5 1176 aaKnown RBP4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 SEC63Q9UGP8 760 aaKnown RBP4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 EXOGQ9Y2C4 368 aaKnown RBP4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.03□□□□□ -1.763e-10■□□□□ 10.6
SMARCC1-207ENST00000485833 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 KALRNO60229 2985 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 MIA3Q5JRA6 1907 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 TICRRQ7Z2Z1 1910 aa4.03□□□□□ -1.76
SMARCC1-207ENST00000485833 DOCK6Q96HP0 2047 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 ZNF532Q9HCE3 1301 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 TEP1Q99973 2627 aaKnown RBP4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 IGKV6D-41A0A0C4DH26 115 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 LOC101059948A0A1B0GTJ6 334 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 HIDE1A8MVS5 230 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 RSPH10B2B2RC85 870 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 HAS3O00219 553 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 AP3D1O14617 1153 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 VILLO15195 856 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 ZBED4O75132 1171 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 PRKRAO75569 313 aaKnown RBP4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 CDC123O75794 336 aaPredicted RBP4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 RSPH10BP0C881 870 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 VPREB1P12018 145 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 SLC15A1P46059 708 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 CDR2Q01850 454 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 TEAD2Q15562 447 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 SLC1A5Q15758 541 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 CYP4A22Q5TCH4 519 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 C12orf60Q5U649 245 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 TMCO3Q6UWJ1 677 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 Q6ZSR9 355 aa4.02□□□□□ -1.77
SMARCC1-207ENST00000485833 HAUS6Q7Z4H7 955 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms