RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 GNB5O14775 395 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 HAT1O14929 419 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 DSCR3O14972 297 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 NKX2-8O15522 239 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 ZSCAN9O15535 394 aaPredicted RBP5.45□□□□□ -1.54
CUX1-208ENST00000485792 PHGDHO43175 533 aaKnown RBP5.45□□□□□ -1.54
CUX1-208ENST00000485792 FOXS1O43638 330 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 KLK8O60259 260 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 ZNF500O60304 480 aaPredicted RBP5.45□□□□□ -1.54
CUX1-208ENST00000485792 ALOX12BO75342 701 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 RGS9O75916 674 aaPredicted RBP5.45□□□□□ -1.54
CUX1-208ENST00000485792 DNAJB5O75953 348 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 OR2B3O76000 313 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 UMODP07911 640 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 CTAGE8P0CG41 777 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 SLC35E2BP0CK96 405 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 MTHFD2P13995 350 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 EZRP15311 586 aaKnown RBP5.45□□□□□ -1.54
CUX1-208ENST00000485792 CD1DP15813 335 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 TCN2P20062 427 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 CCND1P24385 295 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 DLSTP36957 453 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 CASP2P42575 452 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 ARSFP54793 590 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 TBPL1P62380 186 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 CSNK1G2P78368 415 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 MC1RQ01726 317 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 DNASE1L3Q13609 305 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 BMPR2Q13873 1038 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 FAM53BQ14153 422 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 LY6DQ14210 128 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 NCF4Q15080 339 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 OR4D1Q15615 310 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 SF1Q15637 639 aaKnown RBP5.45□□□□□ -1.54
CUX1-208ENST00000485792 UAP1Q16222 522 aaPredicted RBP5.45□□□□□ -1.54
CUX1-208ENST00000485792 TBR1Q16650 682 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 UGT8Q16880 541 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 ZC3H12BQ5HYM0 836 aaKnown RBP5.45□□□□□ -1.54
CUX1-208ENST00000485792 GRTP1Q5TC63 336 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 GARNL3Q5VVW2 1013 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 AGTRAPQ6RW13 159 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 VN1R5Q7Z5H4 357 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 CCDC91Q7Z6B0 441 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 SYVN1Q86TM6 617 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 ISCA2Q86U28 154 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 TMEM126BQ8IUX1 230 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 CTAGE4Q8IX94 777 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 PALM2Q8IXS6 379 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 SYTL1Q8IYJ3 562 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 AFAP1L2Q8N4X5 818 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 RAB42Q8N4Z0 105 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 OTUD6BQ8N6M0 293 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 IL22RA1Q8N6P7 574 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 CEP112Q8N8E3 955 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 PDPRQ8NCN5 879 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 ZNF740Q8NDX6 193 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 FBF1Q8TES7 1133 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 KIAA1191Q96A73 305 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 FKBP10Q96AY3 582 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 RHBDF1Q96CC6 855 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 MOCOSQ96EN8 888 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 WDR34Q96EX3 536 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 MVB12AQ96EY5 273 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 LINGO1Q96FE5 620 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 ATOH8Q96SQ7 321 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 MIPEPQ99797 713 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 ZFYVE21Q9BQ24 234 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 MACROD1Q9BQ69 325 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 TGIF2Q9GZN2 237 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 PCBD2Q9H0N5 130 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 CHST8Q9H2A9 424 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 RASSF4Q9H2L5 321 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 ADNPQ9H2P0 1102 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 CDC42EP4Q9H3Q1 356 aaKnown RBP5.45□□□□□ -1.54
CUX1-208ENST00000485792 WDR54Q9H977 334 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 ACTR5Q9H9F9 607 aaPredicted RBP5.45□□□□□ -1.54
CUX1-208ENST00000485792 GPN2Q9H9Y4 310 aaPredicted RBP5.45□□□□□ -1.54
CUX1-208ENST00000485792 NPHS2Q9NP85 383 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 IGSF5Q9NSI5 407 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 TMEM184CQ9NVA4 438 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 GEMIN8Q9NWZ8 242 aaKnown RBP5.45□□□□□ -1.54
CUX1-208ENST00000485792 DHCR7Q9UBM7 475 aaKnown RBP5.45□□□□□ -1.54
CUX1-208ENST00000485792 FETUBQ9UGM5 382 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 PTBP2Q9UKA9 531 aaKnown RBP5.45□□□□□ -1.54
CUX1-208ENST00000485792 TCFL5Q9UL49 500 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 SNX7Q9UNH6 387 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 FARSAQ9Y285 508 aaKnown RBP5.45□□□□□ -1.54
CUX1-208ENST00000485792 OARD1Q9Y530 152 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 ZNF407Q9C0G0 2248 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 SPTBN1Q01082 2364 aaKnown RBP5.45□□□□□ -1.54
CUX1-208ENST00000485792 ARHGAP21Q5T5U3 1957 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 DOPEY2Q9Y3R5 2298 aa5.45□□□□□ -1.54
CUX1-208ENST00000485792 LRRK2Q5S007 2527 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 A0A1B0GX78 115 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 H0YGG7 62 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 TAPBPO15533 448 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 LCMT2O60294 686 aaKnown RBP5.44□□□□□ -1.54
CUX1-208ENST00000485792 SMNDC1O75940 238 aaKnown RBP eCLIP5.44□□□□□ -1.54
CUX1-208ENST00000485792 ALDOAP04075 364 aaKnown RBP5.44□□□□□ -1.54
CUX1-208ENST00000485792 KLK3P07288 261 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms