RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 PHEXP78562 749 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 ACY1Q03154 408 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 ZNF33BQ06732 778 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 DDX39BQ13838 428 aaKnown RBP16.79■□□□□ 0.28
CHMP3-207ENST00000485465 ABRAXAS2Q15018 415 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 GPR19Q15760 415 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 ASPGQ86U10 573 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 RNF175Q8N4F7 328 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 TRPV3Q8NET8 790 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 ZNF473Q8WTR7 871 aaKnown RBP16.79■□□□□ 0.28
CHMP3-207ENST00000485465 TWIST2Q8WVJ9 160 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 SLC13A3Q8WWT9 602 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 ADAMTS14Q8WXS8 1223 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 N4BP2L2Q92802 583 aaPredicted RBP16.79■□□□□ 0.28
CHMP3-207ENST00000485465 TM4SF19Q96DZ7 209 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 ZNF285Q96NJ3 590 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 MTERF1Q99551 399 aaKnown RBP16.79■□□□□ 0.28
CHMP3-207ENST00000485465 TUBB1Q9H4B7 451 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 PRM3Q9NNZ6 103 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 SIDT1Q9NXL6 827 aaKnown RBP16.79■□□□□ 0.28
CHMP3-207ENST00000485465 DLL3Q9NYJ7 618 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 AKAP7Q9P0M2 348 aaPredicted RBP16.79■□□□□ 0.28
CHMP3-207ENST00000485465 DMXL1Q9Y485 3027 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 SERTM1A2A2V5 107 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 EFCAB7A8K855 629 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 MAGEB17A8MXT2 336 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 TMEM150CB9EJG8 249 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 SLCO1B7G3V0H7 640 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 STATHP02808 62 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 EIF2S1P05198 315 aaKnown RBP16.78■□□□□ 0.28
CHMP3-207ENST00000485465 SERPIND1P05546 499 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 CTSBP07858 339 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 HK2P52789 917 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 PWP1Q13610 501 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 TUBB8Q3ZCM7 444 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 SCIMPQ6UWF3 145 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 RNF165Q6ZSG1 346 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 TMPRSS12Q86WS5 348 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 LRRC34Q8IZ02 419 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 CSNK1A1LQ8N752 337 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 CAMKVQ8NCB2 501 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 NT5CQ8TCD5 201 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 CCT6BQ92526 530 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 LIN37Q96GY3 246 aaPredicted RBP16.78■□□□□ 0.28
CHMP3-207ENST00000485465 CMKLR1Q99788 373 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 FANCEQ9HB96 536 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 DMRT3Q9NQL9 472 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 FGF21Q9NSA1 209 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 OCIAD1Q9NX40 245 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 PSD3Q9NYI0 1048 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 VTI1BQ9UEU0 232 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 ADAM21Q9UKJ8 722 aa16.78■□□□□ 0.28
CHMP3-207ENST00000485465 PTPRZ1P23471 2315 aaPredicted RBP16.78■□□□□ 0.28
CHMP3-207ENST00000485465 HEATR5BQ9P2D3 2071 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 PIP5K1BO14986 540 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 HDAC3O15379 428 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 P2RX6O15547 441 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 NDUFS4O43181 175 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 TBX6O95947 436 aaPredicted RBP16.77■□□□□ 0.28
CHMP3-207ENST00000485465 SERPINA6P08185 405 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 RPS13P62277 151 aaKnown RBP16.77■□□□□ 0.28
CHMP3-207ENST00000485465 TUBB3Q13509 450 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 PDCD2Q16342 344 aaPredicted RBP16.77■□□□□ 0.28
CHMP3-207ENST00000485465 TCTE1Q5JU00 501 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 WASHC2DQ5SRD0 308 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 MANEAQ5SRI9 462 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 TRIM46Q7Z4K8 759 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 WDR75Q8IWA0 830 aaKnown RBP16.77■□□□□ 0.28
CHMP3-207ENST00000485465 DDIASQ8IXT1 998 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 ZNF655Q8N720 491 aaPredicted RBP16.77■□□□□ 0.28
CHMP3-207ENST00000485465 BMPERQ8N8U9 685 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 OR1L3Q8NH93 324 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 ZNF501Q96CX3 271 aaPredicted RBP16.77■□□□□ 0.28
CHMP3-207ENST00000485465 CMTM7Q96FZ5 175 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 CHMP6Q96FZ7 201 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 OR6C1Q96RD1 312 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 HBEGFQ99075 208 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 MACROD1Q9BQ69 325 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 MS4A8Q9BY19 250 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 SPRTNQ9H040 489 aaPredicted RBP16.77■□□□□ 0.28
CHMP3-207ENST00000485465 BRF2Q9HAW0 419 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 ENAMQ9NRM1 1142 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 FGFR1OP2Q9NVK5 253 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 SERTAD3Q9UJW9 196 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 PPT2Q9UMR5 302 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 LOXL2Q9Y4K0 774 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 PTGDR2Q9Y5Y4 395 aa16.77■□□□□ 0.28
CHMP3-207ENST00000485465 CCDC187A0A096LP49 1063 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 H3BMH7 237 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 SLC28A1O00337 649 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 TXNDC9O14530 226 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 SKAP2O75563 359 aaPredicted RBP16.76■□□□□ 0.27
CHMP3-207ENST00000485465 TGDSO95455 350 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 TGFB1P01137 390 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 JUNP05412 331 aaKnown RBP16.76■□□□□ 0.27
CHMP3-207ENST00000485465 SLC35G6P0C7Q6 338 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 LINC00032P0C843 101 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 HSD3B1P14060 373 aa16.76■□□□□ 0.27
CHMP3-207ENST00000485465 PTX3P26022 381 aaPredicted RBP16.76■□□□□ 0.27
CHMP3-207ENST00000485465 HSD3B2P26439 372 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms