RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 TFF3Q07654 80 aa12.89□□□□□ -0.35
NUP188-206ENST00000485158 KCNJ11Q14654 390 aa12.89□□□□□ -0.35
NUP188-206ENST00000485158 USP10Q14694 798 aaKnown RBP12.89□□□□□ -0.35
NUP188-206ENST00000485158 PAPD4Q6PIY7 484 aaKnown RBP12.89□□□□□ -0.35
NUP188-206ENST00000485158 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.89□□□□□ -0.35
NUP188-206ENST00000485158 ZNF227Q86WZ6 799 aa12.89□□□□□ -0.35
NUP188-206ENST00000485158 PDSS2Q86YH6 399 aa12.89□□□□□ -0.35
NUP188-206ENST00000485158 PLD3Q8IV08 490 aa12.89□□□□□ -0.35
NUP188-206ENST00000485158 PPFIBP2Q8ND30 876 aa12.89□□□□□ -0.35
NUP188-206ENST00000485158 SDCCAG3Q96C92 435 aa12.89□□□□□ -0.35
NUP188-206ENST00000485158 MFSD3Q96ES6 412 aa12.89□□□□□ -0.35
NUP188-206ENST00000485158 PRAP1Q96NZ9 151 aa12.89□□□□□ -0.35
NUP188-206ENST00000485158 OR1F2PQ96R84 312 aa12.89□□□□□ -0.35
NUP188-206ENST00000485158 LPAR4Q99677 370 aa12.89□□□□□ -0.35
NUP188-206ENST00000485158 LANCL2Q9NS86 450 aa12.89□□□□□ -0.35
NUP188-206ENST00000485158 BFARQ9NZS9 450 aa12.89□□□□□ -0.35
NUP188-206ENST00000485158 LRFN1Q9P244 771 aa12.89□□□□□ -0.35
NUP188-206ENST00000485158 ZNF148Q9UQR1 794 aa12.89□□□□□ -0.35
NUP188-206ENST00000485158 MED16Q9Y2X0 877 aa12.89□□□□□ -0.35
NUP188-206ENST00000485158 SLC22A7Q9Y694 548 aa12.89□□□□□ -0.35
NUP188-206ENST00000485158 ZNF469Q96JG9 3925 aaPredicted RBP12.89□□□□□ -0.35
NUP188-206ENST00000485158 FAM221AA4D161 298 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 FOXO6A8MYZ6 492 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 SLC25A12O75746 678 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 CHRM3P20309 590 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 TRHRP34981 398 aaPredicted RBP12.88□□□□□ -0.35
NUP188-206ENST00000485158 RPL22P35268 128 aaKnown RBP12.88□□□□□ -0.35
NUP188-206ENST00000485158 SESN2P58004 480 aaPredicted RBP12.88□□□□□ -0.35
NUP188-206ENST00000485158 SLC26A5P58743 744 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 HSF1Q00613 529 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 RPS6KA1Q15418 735 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 NSDHLQ15738 373 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 SFT2D3Q587I9 215 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 ZNF468Q5VIY5 522 aaPredicted RBP12.88□□□□□ -0.35
NUP188-206ENST00000485158 RAD9BQ6WBX8 426 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 CYHR1Q6ZMK1 362 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 PRUNE1Q86TP1 453 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 POGLUT1Q8NBL1 392 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 FAM57AQ8TBR7 257 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 COQ3Q9NZJ6 369 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 PPT2Q9UMR5 302 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 CRYL1Q9Y2S2 319 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 NEU2Q9Y3R4 380 aa12.88□□□□□ -0.35
NUP188-206ENST00000485158 SGK494L7N484 410 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 FTCDO95954 541 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 MPC1LP0DKB6 136 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 ENO3P13929 434 aaPredicted RBP12.87□□□□□ -0.35
NUP188-206ENST00000485158 IL1RNP18510 177 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 IMPA1P29218 277 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 TAS2R50P59544 299 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 CDK16Q00536 496 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 OC90Q02509 493 aaPredicted RBP12.87□□□□□ -0.35
NUP188-206ENST00000485158 TSTA3Q13630 321 aaPredicted RBP12.87□□□□□ -0.35
NUP188-206ENST00000485158 ABRAXAS2Q15018 415 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 MFSD4BQ5TF39 518 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 KIAA0930Q6ICG6 404 aaPredicted RBP12.87□□□□□ -0.35
NUP188-206ENST00000485158 DRICH1Q6PGQ1 229 aaPredicted RBP12.87□□□□□ -0.35
NUP188-206ENST00000485158 C4orf22Q6V702 233 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 CENPUQ71F23 418 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 ADCK2Q7Z695 626 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 RPS19BP1Q86WX3 136 aaKnown RBP12.87□□□□□ -0.35
NUP188-206ENST00000485158 CILP2Q8IUL8 1156 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 MARVELD2Q8N4S9 558 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 AFAP1L2Q8N4X5 818 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 CPSF7Q8N684 471 aaKnown RBP12.87□□□□□ -0.35
NUP188-206ENST00000485158 CCDC89Q8N998 374 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 CAMKVQ8NCB2 501 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 RNF214Q8ND24 703 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 LILRB4Q8NHJ6 448 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 GIMAP7Q8NHV1 300 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 FAM136AQ96C01 138 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 SLC30A3Q99726 388 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 TMUB1Q9BVT8 246 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 TSPY26PQ9H489 355 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 ANKHQ9HCJ1 492 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 NPDC1Q9NQX5 325 aaPredicted RBP12.87□□□□□ -0.35
NUP188-206ENST00000485158 PLSCR2Q9NRY7 297 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 INTS10Q9NVR2 710 aaKnown RBP12.87□□□□□ -0.35
NUP188-206ENST00000485158 HCN3Q9P1Z3 774 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 TSR3Q9UJK0 312 aaKnown RBP12.87□□□□□ -0.35
NUP188-206ENST00000485158 SOX13Q9UN79 622 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 VPS9D1Q9Y2B5 631 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 HRH3Q9Y5N1 445 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 HCFC1P51610 2035 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 INTS1Q8N201 2190 aaKnown RBP12.87□□□□□ -0.35
NUP188-206ENST00000485158 ACANP16112 2415 aa12.87□□□□□ -0.35
NUP188-206ENST00000485158 NDC80O14777 642 aa12.86□□□□□ -0.35
NUP188-206ENST00000485158 ZNHIT1O43257 154 aa12.86□□□□□ -0.35
NUP188-206ENST00000485158 ZSCAN5DPP0CG00 497 aa12.86□□□□□ -0.35
NUP188-206ENST00000485158 PTMSP20962 102 aa12.86□□□□□ -0.35
NUP188-206ENST00000485158 MSX1P28360 303 aa12.86□□□□□ -0.35
NUP188-206ENST00000485158 TPP2P29144 1249 aaPredicted RBP12.86□□□□□ -0.35
NUP188-206ENST00000485158 PTGER1P34995 402 aa12.86□□□□□ -0.35
NUP188-206ENST00000485158 CYB561P49447 251 aa12.86□□□□□ -0.35
NUP188-206ENST00000485158 MAPKAPK3Q16644 382 aa12.86□□□□□ -0.35
NUP188-206ENST00000485158 TTLL9Q3SXZ7 439 aa12.86□□□□□ -0.35
NUP188-206ENST00000485158 MEI1Q5TIA1 1274 aa12.86□□□□□ -0.35
NUP188-206ENST00000485158 C3P1Q6ZMU1 363 aa12.86□□□□□ -0.35
NUP188-206ENST00000485158 SLC13A5Q86YT5 568 aaPredicted RBP12.86□□□□□ -0.35
NUP188-206ENST00000485158 DMRTC2Q8IXT2 367 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms