RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 E5RI56 91 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 H7BY64 318 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 EIF3FO00303 357 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-227ENST00000485102 ASNA1O43681 348 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 ZBTB14O43829 449 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 SNRPB2P08579 225 aaKnown RBP12.27□□□□□ -0.45
HDAC6-227ENST00000485102 CD46P15529 392 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 TPSB2P20231 275 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 EEF1DP29692 281 aaKnown RBP12.27□□□□□ -0.45
HDAC6-227ENST00000485102 CASQ1P31415 396 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 KIR3DL1P43629 444 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 XCR1P46094 333 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 SNRPNP63162 240 aaKnown RBP12.27□□□□□ -0.45
HDAC6-227ENST00000485102 ALDH6A1Q02252 535 aaKnown RBP12.27□□□□□ -0.45
HDAC6-227ENST00000485102 SNX1Q13596 522 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 KCNJ11Q14654 390 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 OR1C1Q15619 314 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 TPSAB1Q15661 275 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 MINDY4Q4G0A6 757 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 CRLF3Q8IUI8 442 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 SLC35F6Q8N357 371 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 OTUD6BQ8N6M0 293 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 KCNJ9Q92806 393 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 PRAP1Q96NZ9 151 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 SIGLEC12Q96PQ1 595 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 NPAS2Q99743 824 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 TRIM51Q9BSJ1 452 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 PCBD2Q9H0N5 130 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 KCNK13Q9HB14 408 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 SYBUQ9NX95 663 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 SH3BGRL2Q9UJC5 107 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 SNX12Q9UMY4 172 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 MED16Q9Y2X0 877 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 SLC22A7Q9Y694 548 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 SAR1BQ9Y6B6 198 aa12.27□□□□□ -0.45
HDAC6-227ENST00000485102 INTS1Q8N201 2190 aaKnown RBP12.27□□□□□ -0.45
HDAC6-227ENST00000485102 IGHV3-20A0A0C4DH32 117 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 GOLGA8KD6RF30 607 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 E9PLN8 166 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 GOLGA8TH3BQL2 631 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 C19orf84I3L1E1 186 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 NEURL1O76050 574 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 SP1P08047 785 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 MGAT1P26572 445 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 IMPA1P29218 277 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 MAGEA6P43360 314 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 BASP1P80723 227 aaKnown RBP12.26□□□□□ -0.45
HDAC6-227ENST00000485102 SRSF11Q05519 484 aaKnown RBP12.26□□□□□ -0.45
HDAC6-227ENST00000485102 TSTA3Q13630 321 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-227ENST00000485102 CDSNQ15517 529 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 KRTAP21-3Q3LHN1 58 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 SPINK14Q6IE38 97 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 NEPROQ6NW34 567 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 CES3Q6UWW8 571 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 PLD3Q8IV08 490 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 CHERPQ8IWX8 916 aaKnown RBP12.26□□□□□ -0.45
HDAC6-227ENST00000485102 EID3Q8N140 333 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 GHDCQ8N2G8 530 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 SLC5A8Q8N695 610 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 FAM98AQ8NCA5 519 aaKnown RBP12.26□□□□□ -0.45
HDAC6-227ENST00000485102 CAMKVQ8NCB2 501 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 PPFIBP2Q8ND30 876 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 ACTRT1Q8TDG2 376 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 FAM136AQ96C01 138 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 OR1F2PQ96R84 312 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 DMRTA2Q96SC8 542 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 LPAR4Q99677 370 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 SLC30A3Q99726 388 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 VKORC1Q9BQB6 163 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 TRIM45Q9H8W5 580 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-227ENST00000485102 DHRS7Q9Y394 339 aa12.26□□□□□ -0.45
HDAC6-227ENST00000485102 NAV3Q8IVL0 2385 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 MAGEB16A2A368 324 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 MAGEB17A8MXT2 336 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 NPIPA5E9PKD4 350 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 PGRMC1O00264 195 aaKnown RBP12.25□□□□□ -0.45
HDAC6-227ENST00000485102 ADAM10O14672 748 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 CEP104O60308 925 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 PAMP19021 973 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 CSNK1G2P78368 415 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 MPP1Q00013 466 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 RHAGQ02094 409 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 SLC25A25Q6KCM7 469 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 PAPD4Q6PIY7 484 aaKnown RBP12.25□□□□□ -0.45
HDAC6-227ENST00000485102 PRSS41Q7RTY9 318 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 ADCK2Q7Z695 626 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 DOLPP1Q86YN1 238 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 ARMC10Q8N2F6 343 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 PRELID2Q8N945 189 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 GIMAP7Q8NHV1 300 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 ELP5Q8TE02 316 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 OSBPL9Q96SU4 736 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 OLFM1Q99784 485 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 SARGQ9BW04 601 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 MCCC2Q9HCC0 563 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 ANKHQ9HCJ1 492 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 LANCL2Q9NS86 450 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 TSR3Q9UJK0 312 aaKnown RBP12.25□□□□□ -0.45
HDAC6-227ENST00000485102 NPIPA1Q9UND3 350 aa12.25□□□□□ -0.45
HDAC6-227ENST00000485102 COMMD10Q9Y6G5 202 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms