RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 MGAT1P26572 445 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 CD27P26842 260 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 HNF1BP35680 557 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 PRCPP42785 496 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 FMO5P49326 533 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 PMS2P54278 862 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 MFAP4P55083 255 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 BLOC1S1P78537 153 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 NUCB2P80303 420 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 IL9RQ01113 521 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 BNC1Q01954 994 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 KIF5AQ12840 1032 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 SNX1Q13596 522 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 ZNF273Q14593 569 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 IL11RAQ14626 422 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 COL28A1Q2UY09 1125 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 GKAP1Q5VSY0 366 aaPredicted RBP6.37□□□□□ -1.39
CLK1-212ENST00000482590 KIAA0895LQ68EN5 471 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 RFWD3Q6PCD5 774 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 C19orf48Q6RUI8 117 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 LCLAT1Q6UWP7 414 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 LAYNQ6UX15 382 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 CCNI2Q6ZMN8 369 aaPredicted RBP6.37□□□□□ -1.39
CLK1-212ENST00000482590 SEM1Q6ZVN7 128 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 ADCK2Q7Z695 626 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 ADIPOR2Q86V24 386 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 CHSY1Q86X52 802 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 PDSS2Q86YH6 399 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 DHX40Q8IX18 779 aaKnown RBP6.37□□□□□ -1.39
CLK1-212ENST00000482590 BOLLQ8N9W6 283 aaKnown RBP6.37□□□□□ -1.39
CLK1-212ENST00000482590 WFDC5Q8TCV5 224 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 DQX1Q8TE96 717 aaKnown RBP6.37□□□□□ -1.39
CLK1-212ENST00000482590 ABHD5Q8WTS1 349 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 SMARCE1Q969G3 411 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 SLC35C1Q96A29 364 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 KLHL29Q96CT2 875 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 DTNBP1Q96EV8 351 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 PRR11Q96HE9 360 aaPredicted RBP6.37□□□□□ -1.39
CLK1-212ENST00000482590 HSFY1Q96LI6 401 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 PRICKLE1Q96MT3 831 aaPredicted RBP6.37□□□□□ -1.39
CLK1-212ENST00000482590 OMDQ99983 421 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 FERMT1Q9BQL6 677 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 TRIM62Q9BVG3 475 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 MIS12Q9H081 205 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 CLSTN2Q9H4D0 955 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 POLR1BQ9H9Y6 1135 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 FBXL12Q9NXK8 326 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 CDYLQ9Y232 598 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 OSGIN2Q9Y236 505 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 ACTL7AQ9Y615 435 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 LOC400499M0QZD8 3231 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 CHD5Q8TDI0 1954 aa6.37□□□□□ -1.39
CLK1-212ENST00000482590 PTPRQQ9UMZ3 2332 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 GOLGA6L7A0A1B0GV03 622 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 CTAGE15A4D2H0 777 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 F5H5T6 163 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 L7N2F9 121 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 SLC33A1O00400 549 aaPredicted RBP6.36□□□□□ -1.39
CLK1-212ENST00000482590 LDLRAD4O15165 306 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 YKT6O15498 198 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 DFNA5O60443 496 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 SLC43A1O75387 559 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 ITGA10O75578 1167 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 HEXIM1O94992 359 aaKnown RBP6.36□□□□□ -1.39
CLK1-212ENST00000482590 IGLV3-27P01718 113 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 SRPRAP08240 638 aaKnown RBP6.36□□□□□ -1.39
CLK1-212ENST00000482590 CTAGE8P0CG41 777 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 PIM1P11309 404 aaPredicted RBP6.36□□□□□ -1.39
CLK1-212ENST00000482590 CHN1P15882 459 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 TCEA1P23193 301 aaKnown RBP6.36□□□□□ -1.39
CLK1-212ENST00000482590 SLC6A4P31645 630 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 CRHR1P34998 444 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 CPOXP36551 454 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 PPP1R2P41236 205 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 CSKP41240 450 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 PSMD8P48556 350 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 ARRB1P49407 418 aaPredicted RBP6.36□□□□□ -1.39
CLK1-212ENST00000482590 ADARP55265 1226 aaKnown RBP6.36□□□□□ -1.39
CLK1-212ENST00000482590 NIPAL4Q0D2K0 466 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 ELP6Q0PNE2 266 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 CHIT1Q13231 466 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 THOC5Q13769 683 aaKnown RBP6.36□□□□□ -1.39
CLK1-212ENST00000482590 CST6Q15828 149 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 HNRNPA1L2Q32P51 320 aaKnown RBP6.36□□□□□ -1.39
CLK1-212ENST00000482590 PLA1AQ53H76 456 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 PAPD7Q5XG87 772 aaKnown RBP6.36□□□□□ -1.39
CLK1-212ENST00000482590 ANKRD40Q6AI12 368 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 PMF1Q6P1K2 205 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 DHRS13Q6UX07 377 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 CTAGE6Q86UF2 777 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 TAC4Q86UU9 113 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 CTAGE4Q8IX94 777 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 ZC3H3Q8IXZ2 948 aaKnown RBP6.36□□□□□ -1.39
CLK1-212ENST00000482590 RBM15BQ8NDT2 890 aaKnown RBP6.36□□□□□ -1.39
CLK1-212ENST00000482590 OR2T34Q8NGX1 318 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 BCAS4Q8TDM0 211 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 CLEC4CQ8WTT0 213 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 TFAP2CQ92754 450 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 AZIN2Q96A70 460 aa6.36□□□□□ -1.39
CLK1-212ENST00000482590 NXPE2Q96DL1 559 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms