RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 NEIL1Q96FI4 390 aaPredicted RBP7.49□□□□□ -1.21
SNX13-208ENST00000482558 PPP1R36Q96LQ0 422 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 PPP3R2Q96LZ3 170 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 PLEKHG4BQ96PX9 1271 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 TRAPPC9Q96Q05 1148 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 GDF15Q99988 308 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 ADI1Q9BV57 179 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 JAM3Q9BX67 310 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 SLC2A11Q9BYW1 496 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 ZBP1Q9H171 429 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 POFUT1Q9H488 388 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 SARS2Q9NP81 518 aaKnown RBP7.49□□□□□ -1.21
SNX13-208ENST00000482558 ASAH2Q9NR71 780 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 CCDC167Q9P0B6 97 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 ABCD2Q9UBJ2 740 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 CD300AQ9UGN4 299 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 EIF2B4Q9UI10 523 aaKnown RBP7.49□□□□□ -1.21
SNX13-208ENST00000482558 LEF1Q9UJU2 399 aaPredicted RBP7.49□□□□□ -1.21
SNX13-208ENST00000482558 PCTPQ9UKL6 214 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 SLC8A2Q9UPR5 921 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 HS3ST2Q9Y278 367 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 MED16Q9Y2X0 877 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 FIS1Q9Y3D6 152 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 DTNAQ9Y4J8 743 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 OARD1Q9Y530 152 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 LTBP2Q14767 1821 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 TET1Q8NFU7 2136 aa7.49□□□□□ -1.21
SNX13-208ENST00000482558 GLYATL1P3A0A0U1RQE8 302 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 C1orf232A0A0U1RR37 186 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 PRSS51A0A1B0GVH4 220 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 TCRBV3S1A0A5B6 114 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 AGAP14A8MT82 685 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 H3BNX3 289 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 H7BY64 318 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 SLC28A1O00337 649 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 PLOD2O00469 737 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 SLC9A3R1O14745 358 aaPredicted RBP7.48□□□□□ -1.21
SNX13-208ENST00000482558 SLC16A5O15375 505 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 HNRNPRO43390 633 aaKnown RBP7.48□□□□□ -1.21
SNX13-208ENST00000482558 ASNA1O43681 348 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 SLC22A3O75751 556 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 CYP2A6P11509 494 aaPredicted RBP7.48□□□□□ -1.21
SNX13-208ENST00000482558 HGFP14210 728 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 TYRP14679 529 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 ZNF30P17039 623 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 VCLP18206 1134 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 XRCC1P18887 633 aaPredicted RBP7.48□□□□□ -1.21
SNX13-208ENST00000482558 IL10P22301 178 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 ACRV1P26436 265 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 HOXA9P31269 272 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 SGSHP51688 502 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 EPHA5P54756 1037 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 CDH13P55290 713 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 WDR5P61964 334 aaKnown RBP7.48□□□□□ -1.21
SNX13-208ENST00000482558 RPS16P62249 146 aaKnown RBP7.48□□□□□ -1.21
SNX13-208ENST00000482558 CDKL1Q00532 357 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 EMX2Q04743 252 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.48□□□□□ -1.21
SNX13-208ENST00000482558 PTPRCAPQ14761 206 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 MYLK3Q32MK0 819 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 MTX3Q5HYI7 312 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 TXNDC8Q6A555 127 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 CLEC6AQ6EIG7 209 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 BRAT1Q6PJG6 821 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 USP51Q70EK9 711 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 CEP68Q76N32 757 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 SLC9B2Q86UD5 537 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 SPATA24Q86W54 205 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 SERPINA9Q86WD7 417 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 DHFR2Q86XF0 187 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 PIANPQ8IYJ0 282 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 NLGN4XQ8N0W4 816 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 TAGAPQ8N103 731 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 MARVELD2Q8N4S9 558 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 ZBTB2Q8N680 514 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 TMCO5AQ8N6Q1 288 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 GLB1L3Q8NCI6 653 aaPredicted RBP7.48□□□□□ -1.21
SNX13-208ENST00000482558 TNIP2Q8NFZ5 429 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 EEF1AKMT1Q8WVE0 214 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 GBF1Q92538 1859 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 EXT2Q93063 718 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 FAM120BQ96EK7 910 aaKnown RBP7.48□□□□□ -1.21
SNX13-208ENST00000482558 RNF125Q96EQ8 232 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 SCRN2Q96FV2 425 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 LRIG1Q96JA1 1093 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 MCCC1Q96RQ3 725 aaPredicted RBP7.48□□□□□ -1.21
SNX13-208ENST00000482558 UHRF1Q96T88 793 aaPredicted RBP7.48□□□□□ -1.21
SNX13-208ENST00000482558 PRPF18Q99633 342 aaKnown RBP7.48□□□□□ -1.21
SNX13-208ENST00000482558 NPAS2Q99743 824 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 CENPKQ9BS16 269 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 SLC29A3Q9BZD2 475 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 ASB8Q9H765 288 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 PLXNA4Q9HCM2 1894 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 ARMC1Q9NVT9 282 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 AIG1Q9NVV5 245 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 SMPD4Q9NXE4 827 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 KCTD5Q9NXV2 234 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 PLK2Q9NYY3 685 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 CFAP97Q9P2B7 532 aa7.48□□□□□ -1.21
SNX13-208ENST00000482558 GPR160Q9UJ42 338 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms