RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 GATA5Q9BWX5 397 aaPredicted RBP11.13□□□□□ -0.63
HPS4-212ENST00000481910 PITPNM3Q9BZ71 974 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 KLHL25Q9H0H3 589 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 SH2B3Q9UQQ2 575 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 KLHL20Q9Y2M5 609 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 MN1Q10571 1320 aaPredicted RBP11.13□□□□□ -0.63
HPS4-212ENST00000481910 A0A0J9YY10 115 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 TLCD2A6NGC4 264 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 SRRM3A6NNA2 597 aaPredicted RBP11.13□□□□□ -0.63
HPS4-212ENST00000481910 A8MU76 341 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 H7BY64 318 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 GIPC1O14908 333 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 FGF3P11487 239 aaPredicted RBP11.13□□□□□ -0.63
HPS4-212ENST00000481910 CDK4P11802 303 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 HOXB1P14653 301 aaPredicted RBP11.13□□□□□ -0.63
HPS4-212ENST00000481910 PVRP15151 417 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 TSPAN8P19075 237 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 ARL1P40616 181 aaPredicted RBP11.13□□□□□ -0.63
HPS4-212ENST00000481910 LSSP48449 732 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 NAA20P61599 178 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 ABATP80404 500 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 RUNX1T1Q06455 604 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 E2F2Q14209 437 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 CHI3L2Q15782 390 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 ANKRD39Q53RE8 183 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 CATSPEREQ5SY80 951 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 CACHD1Q5VU97 1274 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 ZNF574Q6ZN55 896 aaPredicted RBP11.13□□□□□ -0.63
HPS4-212ENST00000481910 SLCO6A1Q86UG4 719 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 OR4D9Q8NGE8 314 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 SLC5A11Q8WWX8 675 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 PRAP1Q96NZ9 151 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 CD180Q99467 661 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 DPH7Q9BTV6 452 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 TRIM8Q9BZR9 551 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 NOL11Q9H8H0 719 aaKnown RBP11.13□□□□□ -0.63
HPS4-212ENST00000481910 ZBTB26Q9HCK0 441 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 C1GALT1Q9NS00 363 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.13□□□□□ -0.63
HPS4-212ENST00000481910 GPRC5BQ9NZH0 403 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 APOBEC2Q9Y235 224 aaKnown RBP11.13□□□□□ -0.63
HPS4-212ENST00000481910 HEATR5BQ9P2D3 2071 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 SLC9B1P1A6NJY1 282 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 D6RAR5 112 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 E7EQ34 232 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 FKBP9O95302 570 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 FTH1P19P0C7X4 201 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 CDH1P12830 882 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 EPORP19235 508 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 MAGP20916 626 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 BGNP21810 368 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 SDHBP21912 280 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 GRIA3P42263 894 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 RBBP7Q16576 425 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 PDCD4Q53EL6 469 aaKnown RBP11.12□□□□□ -0.63
HPS4-212ENST00000481910 DEPDC1Q5TB30 811 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 ADCK2Q7Z695 626 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 TMPRSS11BQ86T26 416 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 KIRREL3Q8IZU9 778 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 TEX19Q8NA77 164 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 ZUFSPQ96AP4 578 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 MAELQ96JY0 434 aaKnown RBP11.12□□□□□ -0.63
HPS4-212ENST00000481910 CNDP1Q96KN2 507 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 SEMA6CQ9H3T2 930 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 GSTO2Q9H4Y5 243 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 CRNNQ9UBG3 495 aaPredicted RBP11.12□□□□□ -0.63
HPS4-212ENST00000481910 SNX7Q9UNH6 387 aa11.12□□□□□ -0.63
HPS4-212ENST00000481910 IGHV5-51A0A0C4DH38 117 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 IGKV1-8A0A0C4DH67 115 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 IGHV5-10-1A0A0J9YXX1 117 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 PPP6CO00743 305 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 H2AFYO75367 372 aaKnown RBP11.11□□□□□ -0.63
HPS4-212ENST00000481910 MLYCDO95822 493 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 ST6GAL1P15907 406 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 HRH2P25021 359 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 PLA2G5P39877 138 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 SEPHS1P49903 392 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 INSM1Q01101 510 aaPredicted RBP11.11□□□□□ -0.63
HPS4-212ENST00000481910 IRF8Q02556 426 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 CHIT1Q13231 466 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 XKR6Q5GH73 641 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 CORO6Q6QEF8 472 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 DHRS13Q6UX07 377 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 FRMD7Q6ZUT3 714 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 OR52B6Q8NGF0 335 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 AIFM2Q9BRQ8 373 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 RTKNQ9BST9 563 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 MANSC1Q9H8J5 431 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 ACTR8Q9H981 624 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 SLC6A20Q9NP91 592 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 FANCFQ9NPI8 374 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 TMEM184CQ9NVA4 438 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 NOP53Q9NZM5 478 aaKnown RBP11.11□□□□□ -0.63
HPS4-212ENST00000481910 PDP2Q9P2J9 529 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 CEP250Q9BV73 2442 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 OR7A17O14581 309 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 TOX3O15405 576 aaPredicted RBP11.11□□□□□ -0.63
HPS4-212ENST00000481910 NPHS1O60500 1241 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 KCNK5O95279 499 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 ZBTB11O95625 1053 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms