RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 TMTC4Q5T4D3 741 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 METTL2BQ6P1Q9 378 aaKnown RBP11.68□□□□□ -0.54
TRA2B-212ENST00000480461 INO80CQ6PI98 192 aaPredicted RBP11.68□□□□□ -0.54
TRA2B-212ENST00000480461 IGF2-ASQ6U949 168 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 TIPARPQ7Z3E1 657 aaKnown RBP11.68□□□□□ -0.54
TRA2B-212ENST00000480461 VN1R5Q7Z5H4 357 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 ADCK2Q7Z695 626 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 TMPRSS11BQ86T26 416 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 LSMEM2Q8N112 164 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 SHISA5Q8N114 240 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 PIP4P2Q8N4L2 257 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 RDH11Q8TC12 318 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 TRPC4APQ8TEL6 797 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 ZFYVE21Q9BQ24 234 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 GATA5Q9BWX5 397 aaPredicted RBP11.68□□□□□ -0.54
TRA2B-212ENST00000480461 DPH1Q9BZG8 443 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 AICDAQ9GZX7 198 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 PELI2Q9HAT8 420 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 MLXIPLQ9NP71 852 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 TNFRSF12AQ9NP84 129 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 SEMA4BQ9NPR2 832 aaPredicted RBP11.68□□□□□ -0.54
TRA2B-212ENST00000480461 AKAP7Q9P0M2 348 aaPredicted RBP11.68□□□□□ -0.54
TRA2B-212ENST00000480461 PCDHGA4Q9Y5G9 962 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 NBPF19A0A087WUL8 3843 aa11.68□□□□□ -0.54
TRA2B-212ENST00000480461 TRBC2A0A5B9 178 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 TMEM120BA0PK00 339 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 TERTO14746 1132 aaKnown RBP11.67□□□□□ -0.54
TRA2B-212ENST00000480461 CLGNO14967 610 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 NVLO15381 856 aaKnown RBP11.67□□□□□ -0.54
TRA2B-212ENST00000480461 OR1F1O43749 312 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 SRPX2O60687 465 aaPredicted RBP11.67□□□□□ -0.54
TRA2B-212ENST00000480461 KATNA1O75449 491 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 SUPT7LO94864 414 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 NTRK1P04629 796 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 EZRP15311 586 aaKnown RBP11.67□□□□□ -0.54
TRA2B-212ENST00000480461 REEP5Q00765 189 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 IRF8Q02556 426 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 CLCQ05315 142 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 HYAL2Q12891 473 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 TRAF3Q13114 568 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 SLBPQ14493 270 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRA2B-212ENST00000480461 TBCCQ15814 346 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 HKDC1Q2TB90 917 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 PRTGQ2VWP7 1150 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 ZC3H12BQ5HYM0 836 aaKnown RBP11.67□□□□□ -0.54
TRA2B-212ENST00000480461 DCAF12Q5T6F0 453 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 LCN10Q6JVE6 187 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 SYVN1Q86TM6 617 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 ZFAND4Q86XD8 727 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 SLC22A9Q8IVM8 553 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 RNF175Q8N4F7 328 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 ZNF655Q8N720 491 aaPredicted RBP11.67□□□□□ -0.54
TRA2B-212ENST00000480461 CCNYL1Q8N7R7 359 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 L3MBTL4Q8NA19 623 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 CCDC63Q8NA47 563 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 MFSD9Q8NBP5 474 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 CREB3L4Q8TEY5 395 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 PTCD3Q96EY7 689 aaKnown RBP11.67□□□□□ -0.54
TRA2B-212ENST00000480461 PKNOX2Q96KN3 472 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 RUFY1Q96T51 708 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 SELENOSQ9BQE4 189 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 NTMT1Q9BV86 223 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 DDA1Q9BW61 102 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 CAPS2Q9BXY5 557 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 EHD1Q9H4M9 534 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 ZNF395Q9H8N7 513 aaPredicted RBP11.67□□□□□ -0.54
TRA2B-212ENST00000480461 THSD1Q9NS62 852 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 SERTAD3Q9UJW9 196 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 RARRES3Q9UL19 164 aa11.67□□□□□ -0.54
TRA2B-212ENST00000480461 MRPS2Q9Y399 296 aaKnown RBP11.67□□□□□ -0.54
TRA2B-212ENST00000480461 FLNCQ14315 2725 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 WDR91A4D1P6 747 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 FITM1A5D6W6 292 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 GOLGA6L10A6NI86 522 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 HAX1O00165 279 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 ZNF749O43361 778 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 TRIM13O60858 407 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 H2AFYO75367 372 aaKnown RBP11.66□□□□□ -0.54
TRA2B-212ENST00000480461 OR2B3O76000 313 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 EIF2S1P05198 315 aaKnown RBP11.66□□□□□ -0.54
TRA2B-212ENST00000480461 ITGAXP20702 1163 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 SERPINB4P48594 390 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 PIK3CGP48736 1102 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 SLC18A1P54219 525 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 ITGA1P56199 1179 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 RPS15AP62244 130 aaKnown RBP11.66□□□□□ -0.54
TRA2B-212ENST00000480461 NFATC3Q12968 1075 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 RBBP5Q15291 538 aaKnown RBP11.66□□□□□ -0.54
TRA2B-212ENST00000480461 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRA2B-212ENST00000480461 LETMD1Q6P1Q0 360 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 TMIGD1Q6UXZ0 262 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 ZCCHC23Q6ZST2 131 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 BPHLQ86WA6 291 aaPredicted RBP11.66□□□□□ -0.54
TRA2B-212ENST00000480461 PPP1R3BQ86XI6 285 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 ANKRD42Q8N9B4 389 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 KCT2Q8NC54 265 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 OR4F6Q8NGB9 312 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 AIF1LQ9BQI0 150 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 B3GNT4Q9C0J1 378 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 IQCGQ9H095 443 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms