RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SLC19A3Q9BZV2 496 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 SLC38A1Q9H2H9 487 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 PPP4R1LQ9P1A2 415 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 SLC23A2Q9UGH3 650 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 SLC6A14Q9UN76 642 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 WDR45Q9Y484 360 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 PCDHGA9Q9Y5G4 932 aaKnown RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 BPGMP07738 259 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 NDUFV1P49821 464 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 FABP6P51161 128 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 ZNF543Q08ER8 600 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 BTG3Q14201 252 aaPredicted RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 MEP1BQ16820 701 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 STXBP5Q5T5C0 1151 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 GPAT2Q6NUI2 795 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 ZNF627Q7L945 461 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 UBE2J2Q8N2K1 259 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 GALNT15Q8N3T1 639 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 OR5K1Q8NHB7 308 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 WFIKKN2Q8TEU8 576 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 RBP7Q96R05 134 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 WDR24Q96S15 920 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 EIF5A2Q9GZV4 153 aaKnown RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 GFOD1Q9NXC2 390 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 PLSCR5A0PG75 271 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 TBL1XO60907 577 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 CPNE3O75131 537 aaKnown RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 RGS11O94810 467 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 EGFP01133 1207 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 HLA-HP01893 362 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 CD48P09326 243 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 AKR1A1P14550 325 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 TNFSF8P32971 234 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 HOXD12P35452 270 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 TAGLN2P37802 199 aaKnown RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 PBX3P40426 434 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 CYP4F8P98187 520 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 RHDQ02161 417 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 AUHQ13825 339 aaKnown RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 GRM2Q14416 872 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 C22orf42Q6IC83 251 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 DNAJC10Q8IXB1 793 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 C15orf54Q8N8G6 183 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 PRELID2Q8N945 189 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 IL17RCQ8NAC3 791 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 GOT1L1Q8NHS2 421 aaPredicted RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 SLAMF7Q9NQ25 335 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 SLC22A11Q9NSA0 550 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 ZNF355PQ9NSJ1 428 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 CCDC167Q9P0B6 97 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 ZNF69Q9UC07 566 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 METTL15A6NJ78 407 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 SMLR1H3BR10 107 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 MRASO14807 208 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 SORBS3O60504 671 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 SC5DO75845 299 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 RGS9O75916 674 aaPredicted RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 FGF1P05230 155 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 CRYBA1P05813 215 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 CT45A10P0DMU9 189 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 GP1BBP13224 206 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 ZNF16P17020 682 aaPredicted RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 S1PR1P21453 382 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 CX3CR1P49238 355 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 ST3GAL3Q11203 375 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 PPIGQ13427 754 aaKnown RBP eCLIP5.29□□□□□ -1.56
USF3-202ENST00000478658 PAGE3Q5JUK9 113 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 TSTD2Q5T7W7 516 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 C9orf131Q5VYM1 1079 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 RPL7L1Q6DKI1 246 aaKnown RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 PAPD4Q6PIY7 484 aaKnown RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 SIAH1Q8IUQ4 282 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 GTPBP8Q8N3Z3 284 aaPredicted RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 RAB2BQ8WUD1 216 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 TMEM203Q969S6 136 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 TIMD4Q96H15 378 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 ZNF558Q96NG5 402 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 SPON1Q9HCB6 807 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 KCND1Q9NSA2 647 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 VSX1Q9NZR4 365 aaPredicted RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 CAPN6Q9Y6Q1 641 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 PNPLA7Q6ZV29 1317 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 ISM1B1AKI9 464 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 RFXANKO14593 260 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 PROM1O43490 865 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 VAPBO95292 243 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 C1RP00736 705 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 FHP07954 510 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 SNRPB2P08579 225 aaKnown RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 ALPIP09923 528 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 CD53P19397 219 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 CAP2P40123 477 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 GCGRP47871 477 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 ACOT2P49753 483 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 IDH3GP51553 393 aaPredicted RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 GALK1P51570 392 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 SLC12A3P55017 1021 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 HBG1P69891 147 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 HBG2P69892 147 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 GHRHRQ02643 423 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms