RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 CDYLQ9Y232 598 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 ZGRF1Q86YA3 2104 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 CDC7O00311 574 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 CCL21O00585 134 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 ZBTB14O43829 449 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 SPAG7O75391 227 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 KLHL2O95198 593 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 BRAFP15056 766 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 OTX2P32243 289 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 SLC26A3P40879 764 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 MAGEA12P43365 314 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 KIR3DL1P43629 444 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 ARL4DP49703 201 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 TDGF1P3P51864 188 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 GPR18Q14330 331 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 ABRAXAS1Q6UWZ7 409 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 TBC1D21Q8IYX1 336 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 ACBD4Q8NC06 268 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 PHC3Q8NDX5 983 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 OR5K2Q8NHB8 316 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 DNAJB14Q8TBM8 379 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 MCOLN3Q8TDD5 553 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 NXNL1Q96CM4 212 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 SELENOSQ9BQE4 189 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 CXXC4Q9H2H0 198 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 KCNK9Q9NPC2 374 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 ZNF446Q9NWS9 450 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 EURLQ9NYK6 297 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 CPSF2Q9P2I0 782 aaKnown RBP13.86□□□□□ -0.19
USP11-207ENST00000478596 POLG2Q9UHN1 485 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 PADI2Q9Y2J8 665 aa13.86□□□□□ -0.19
USP11-207ENST00000478596 MYO7BQ6PIF6 2116 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 TRGV8A0A0C4DH27 118 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 NCF1BA6NI72 391 aaPredicted RBP13.85□□□□□ -0.19
USP11-207ENST00000478596 SYCE1LA8MT33 242 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 NCF1CA8MVU1 366 aaPredicted RBP13.85□□□□□ -0.19
USP11-207ENST00000478596 ARHGEF33A8MVX0 844 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 PEX12O00623 359 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 KLF7O75840 302 aaPredicted RBP13.85□□□□□ -0.19
USP11-207ENST00000478596 SASH3O75995 380 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 GUCA1CO95843 209 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 TSPAN12O95859 305 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 GSTA1P08263 222 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 COL6A2P12110 1019 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 GFAPP14136 432 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 NCF1P14598 390 aaPredicted RBP13.85□□□□□ -0.19
USP11-207ENST00000478596 CD1DP15813 335 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 CA7P43166 264 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 CCT5P48643 541 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 SSPNQ14714 243 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 TLR1Q15399 786 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 GPR19Q15760 415 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.85□□□□□ -0.19
USP11-207ENST00000478596 RPUSD3Q6P087 351 aaKnown RBP13.85□□□□□ -0.19
USP11-207ENST00000478596 GPSM1Q86YR5 675 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 SYTL1Q8IYJ3 562 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 CENPLQ8N0S6 344 aaPredicted RBP13.85□□□□□ -0.19
USP11-207ENST00000478596 CHDHQ8NE62 594 aaPredicted RBP13.85□□□□□ -0.19
USP11-207ENST00000478596 MZB1Q8WU39 189 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 ALKBH8Q96BT7 664 aaKnown RBP13.85□□□□□ -0.19
USP11-207ENST00000478596 MTFMTQ96DP5 389 aaKnown RBP13.85□□□□□ -0.19
USP11-207ENST00000478596 PKNOX2Q96KN3 472 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 CD180Q99467 661 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 MDFIQ99750 246 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 MAP3K3Q99759 626 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 DPH2Q9BQC3 489 aaPredicted RBP13.85□□□□□ -0.19
USP11-207ENST00000478596 RAB11FIP5Q9BXF6 653 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 TMBIM4Q9HC24 238 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 ABCF3Q9NUQ8 709 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 ARL15Q9NXU5 204 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 CD274Q9NZQ7 290 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 XPR1Q9UBH6 696 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 PLAGL1Q9UM63 463 aa13.85□□□□□ -0.19
USP11-207ENST00000478596 FER1L5A0AVI2 2057 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 TLCD2A6NGC4 264 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 SLC16A5O15375 505 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 SMIM24O75264 130 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 PSIP1O75475 530 aaKnown RBP13.84□□□□□ -0.19
USP11-207ENST00000478596 C1orf105O95561 183 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 ENO2P09104 434 aaPredicted RBP13.84□□□□□ -0.19
USP11-207ENST00000478596 RBP1P09455 135 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 KLK2P20151 261 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 TAC1P20366 129 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 ACADLP28330 430 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 HPDP32754 393 aaPredicted RBP13.84□□□□□ -0.19
USP11-207ENST00000478596 MAGOHP61326 146 aaKnown RBP13.84□□□□□ -0.19
USP11-207ENST00000478596 DLG1Q12959 904 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 ACAP2Q15057 778 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 AGBL2Q5U5Z8 902 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 PRAMEF17Q5VTA0 474 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 ARMC6Q6NXE6 501 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 TAX1BP1Q86VP1 789 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 LCA5Q86VQ0 697 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 SPATA3Q8NHX4 192 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 STAG3L4Q8TBR4 150 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 LCN9Q8WX39 176 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 RAD51AP1Q96B01 352 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 CLIP3Q96DZ5 547 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 ATP6V1G3Q96LB4 118 aa13.84□□□□□ -0.19
USP11-207ENST00000478596 MRPL46Q9H2W6 279 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms