RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 SLC5A2P31639 672 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 GGT5P36269 586 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 ETV3P41162 512 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 HLCSP50747 726 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 ALDH3A2P51648 485 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 DGKQP52824 942 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 ARSFP54793 590 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 CDH15P55291 814 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 MTPNP58546 118 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 RPS14P62263 151 aaKnown RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 YBX1P67809 324 aaKnown RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 SLC7A9P82251 487 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 CYP4F3Q08477 520 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 LMAN2Q12907 356 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 SP140Q13342 867 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 TOP3AQ13472 1001 aaPredicted RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 DCTN2Q13561 401 aaKnown RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 SELPLGQ14242 412 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 MYBPC3Q14896 1274 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 PTPRRQ15256 657 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 NR0B2Q15466 257 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 MAPKAPK3Q16644 382 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 C18orf21Q32NC0 220 aaPredicted RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 GGTA1PQ4G0N0 100 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 RFTN2Q52LD8 501 aaPredicted RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 LRRC23Q53EV4 343 aaPredicted RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 USP39Q53GS9 565 aaKnown RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 CYBRD1Q53TN4 286 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 RUNDC3AQ59EK9 446 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 RBM48Q5RL73 367 aaKnown RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 CCNYL2Q5T2Q4 361 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 TTC23Q5W5X9 447 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 ATG9BQ674R7 924 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 CNKSR3Q6P9H4 555 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 PSRC1Q6PGN9 363 aaPredicted RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 DHRS4L2Q6PKH6 230 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 TPRG1Q6ZUI0 275 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 USP45Q70EL2 814 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 TMEM150AQ86TG1 271 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 DDX53Q86TM3 631 aaKnown RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 RALGPS2Q86X27 583 aaPredicted RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 CLVS1Q8IUQ0 354 aaPredicted RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 MICU2Q8IYU8 434 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 APCDD1Q8J025 514 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 SVOPLQ8N434 492 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 LIX1Q8N485 282 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 ARL14EPQ8N8R7 260 aaPredicted RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 DCBLD1Q8N8Z6 715 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF557Q8N988 423 aaPredicted RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF548Q8NEK5 533 aaPredicted RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 OR2T12Q8NG77 320 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 OR2AP1Q8NGE2 309 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 FIBINQ8TAL6 211 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 WFDC5Q8TCV5 224 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 MAGEE2Q8TD90 523 aaPredicted RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 CHAC2Q8WUX2 184 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 LZICQ8WZA0 190 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 GTF2H4Q92759 462 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 NINJ1Q92982 152 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 FAM162AQ96A26 154 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 SCLYQ96I15 445 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 FBXL20Q96IG2 436 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 ITCHQ96J02 903 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 CNDP2Q96KP4 475 aaKnown RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 PPM1MQ96MI6 270 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF583Q96ND8 569 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 COPS8Q99627 209 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 TUBA1CQ9BQE3 449 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 BOCQ9BWV1 1114 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 NPLQ9BXD5 320 aaPredicted RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 TRIM8Q9BZR9 551 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 HIPK3Q9H422 1215 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 SLC32A1Q9H598 525 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 CLMPQ9H6B4 373 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 MAGIXQ9H6Y5 334 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 UBE2ZQ9H832 354 aaPredicted RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 RMND5AQ9H871 391 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF334Q9HCZ1 680 aaPredicted RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 IL26Q9NPH9 171 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 C1orf109Q9NX04 203 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 SIRT5Q9NXA8 310 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 USE1Q9NZ43 259 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 TMEM9Q9P0T7 183 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 DNAJB9Q9UBS3 223 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 KLQ9UEF7 1012 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 CIDEBQ9UHD4 219 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 CDH7Q9ULB5 785 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF490Q9ULM2 529 aaPredicted RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 SNX6Q9UNH7 406 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 USP22Q9UPT9 525 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 MAN2B2Q9Y2E5 1009 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 TMED5Q9Y3A6 229 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 PPIL1Q9Y3C6 166 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 NEUROG3Q9Y4Z2 214 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 WDR87Q6ZQQ6 2873 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 PCM1Q15154 2024 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 LRRK1Q38SD2 2015 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 DENND4AQ7Z401 1863 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 NUP210Q8TEM1 1887 aaPredicted RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 IGLV3-16A0A075B6K0 115 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms