RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 RFPL1O75677 317 aa16.79■□□□□ 0.28
PTPN7-209ENST00000477554 CCNDBP1O95273 360 aa16.79■□□□□ 0.28
PTPN7-209ENST00000477554 ZIC2O95409 532 aaPredicted RBP16.79■□□□□ 0.28
PTPN7-209ENST00000477554 ONECUT2O95948 504 aa16.79■□□□□ 0.28
PTPN7-209ENST00000477554 CCDC166P0CW27 439 aa16.79■□□□□ 0.28
PTPN7-209ENST00000477554 FOLR3P41439 243 aa16.79■□□□□ 0.28
PTPN7-209ENST00000477554 ABATP80404 500 aa16.79■□□□□ 0.28
PTPN7-209ENST00000477554 LCTLQ6UWM7 567 aa16.79■□□□□ 0.28
PTPN7-209ENST00000477554 ZNF605Q86T29 641 aa16.79■□□□□ 0.28
PTPN7-209ENST00000477554 APLFQ8IW19 511 aaPredicted RBP16.79■□□□□ 0.28
PTPN7-209ENST00000477554 SRRM1Q8IYB3 904 aaKnown RBP16.79■□□□□ 0.28
PTPN7-209ENST00000477554 KCT2Q8NC54 265 aa16.79■□□□□ 0.28
PTPN7-209ENST00000477554 THAP4Q8WY91 577 aa16.79■□□□□ 0.28
PTPN7-209ENST00000477554 NEIL2Q969S2 332 aa16.79■□□□□ 0.28
PTPN7-209ENST00000477554 ARL8AQ96BM9 186 aa16.79■□□□□ 0.28
PTPN7-209ENST00000477554 TLCD1Q96CP7 247 aa16.79■□□□□ 0.28
PTPN7-209ENST00000477554 SMC6Q96SB8 1091 aa16.79■□□□□ 0.28
PTPN7-209ENST00000477554 TMEM184CQ9NVA4 438 aa16.79■□□□□ 0.28
PTPN7-209ENST00000477554 A0A087X1B8 175 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 OR2W5A6NFC9 320 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 SOCS6O14544 535 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 TAPBPO15533 448 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 SLC28A2O43868 658 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 HIST1H2AGP0C0S8 130 aaPredicted RBP16.78■□□□□ 0.28
PTPN7-209ENST00000477554 CD1DP15813 335 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 KRT4P19013 534 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 HIST1H2ADP20671 130 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 IRF9Q00978 393 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 EXOC3L1Q86VI1 746 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 C17orf64Q86WR6 236 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 NKAPQ8N5F7 415 aaKnown RBP16.78■□□□□ 0.28
PTPN7-209ENST00000477554 FDCSPQ8NFU4 85 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 HIST1H2AHQ96KK5 128 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 HIST1H2AJQ99878 128 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 TMEM79Q9BSE2 394 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 H2AFJQ9BTM1 129 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 NUDT9Q9BW91 350 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 ZNF304Q9HCX3 659 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 SLC22A14Q9Y267 594 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 ACOT9Q9Y305 439 aa16.78■□□□□ 0.28
PTPN7-209ENST00000477554 SPTA1P02549 2419 aa16.77■□□□□ 0.28
PTPN7-209ENST00000477554 A0A096LPK6 155 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 VSTM2BA6NLU5 285 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 SUV39H1O43463 412 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 PRAMEF4O60810 478 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 JRKO75564 520 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 C2P06681 752 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 SLC35E2BP0CK96 405 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 PYGBP11216 843 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 VARSP26640 1264 aaKnown RBP16.77■□□□□ 0.27
PTPN7-209ENST00000477554 SLC26A3P40879 764 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 CSRP3P50461 194 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 AP1S2P56377 157 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 MAGOHP61326 146 aaKnown RBP16.77■□□□□ 0.27
PTPN7-209ENST00000477554 SLC18A2Q05940 514 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 KLC1Q07866 573 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 CSHL1Q14406 222 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 SSPNQ14714 243 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 FAM214AQ32MH5 1076 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 PRAMEF9Q5VWM5 478 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 CAPN13Q6MZZ7 669 aaPredicted RBP16.77■□□□□ 0.27
PTPN7-209ENST00000477554 TBC1D1Q86TI0 1168 aaPredicted RBP16.77■□□□□ 0.27
PTPN7-209ENST00000477554 LCA5Q86VQ0 697 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 THOC6Q86W42 341 aaKnown RBP16.77■□□□□ 0.27
PTPN7-209ENST00000477554 PDSS2Q86YH6 399 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 OR9A4Q8NGU2 314 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 ZCCHC10Q8TBK6 192 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 COL26A1Q96A83 441 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 RHBDF1Q96CC6 855 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 AICDAQ9GZX7 198 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 VPS11Q9H270 941 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 P4HTMQ9NXG6 502 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 TUBD1Q9UJT1 453 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 OARD1Q9Y530 152 aa16.77■□□□□ 0.27
PTPN7-209ENST00000477554 C4orf51C9J302 202 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 ENO2P09104 434 aaPredicted RBP16.76■□□□□ 0.27
PTPN7-209ENST00000477554 COL6A2P12110 1019 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 IL1RNP18510 177 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 CCT5P48643 541 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 MUM1Q2TAK8 710 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 LACTB2Q53H82 288 aaPredicted RBP16.76■□□□□ 0.27
PTPN7-209ENST00000477554 TTMPQ5BVD1 217 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 YOD1Q5VVQ6 348 aaPredicted RBP16.76■□□□□ 0.27
PTPN7-209ENST00000477554 ABHD11Q8NFV4 315 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 OR4K1Q8NGD4 311 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 STT3BQ8TCJ2 826 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 EXT2Q93063 718 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 RERGQ96A58 199 aaPredicted RBP16.76■□□□□ 0.27
PTPN7-209ENST00000477554 FKBP10Q96AY3 582 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 C8orf44Q96CB5 159 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 TM4SF19Q96DZ7 209 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 MMABQ96EY8 250 aaPredicted RBP16.76■□□□□ 0.27
PTPN7-209ENST00000477554 UBXN10Q96LJ8 280 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 DERL2Q9GZP9 239 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 SLC26A1Q9H2B4 701 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 ZBTB20Q9HC78 741 aaPredicted RBP16.76■□□□□ 0.27
PTPN7-209ENST00000477554 SSU72Q9NP77 194 aaKnown RBP16.76■□□□□ 0.27
PTPN7-209ENST00000477554 ACSS2Q9NR19 701 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 IGSF5Q9NSI5 407 aa16.76■□□□□ 0.27
PTPN7-209ENST00000477554 DCDC2Q9UHG0 476 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms