RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 LRRC4CQ9HCJ2 640 aa10.22□□□□□ -0.77
SEC13-214ENST00000476597 RIC8BQ9NVN3 520 aa10.22□□□□□ -0.77
SEC13-214ENST00000476597 ZFATQ9P243 1243 aa10.22□□□□□ -0.77
SEC13-214ENST00000476597 IKZF3Q9UKT9 509 aa10.22□□□□□ -0.77
SEC13-214ENST00000476597 SLC22A7Q9Y694 548 aa10.22□□□□□ -0.77
SEC13-214ENST00000476597 CCDC88CQ9P219 2028 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 POLEQ07864 2286 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 ANKUB1A6NFN9 424 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 NDC80O14777 642 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 WFS1O76024 890 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 GUCA1CO95843 209 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 CYC1P08574 325 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 C8orf89P0DMQ9 161 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 IL1RNP18510 177 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 PWP1Q13610 501 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 ZNF169Q14929 603 aaPredicted RBP10.21□□□□□ -0.77
SEC13-214ENST00000476597 FASTKD3Q14CZ7 662 aaKnown RBP10.21□□□□□ -0.77
SEC13-214ENST00000476597 PPP1R3AQ16821 1122 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 B3GNTL1Q67FW5 361 aaPredicted RBP10.21□□□□□ -0.77
SEC13-214ENST00000476597 RPUSD3Q6P087 351 aaKnown RBP10.21□□□□□ -0.77
SEC13-214ENST00000476597 SBSNQ6UWP8 590 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 STRA8Q7Z7C7 330 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 ZC3HC1Q86WB0 502 aaKnown RBP10.21□□□□□ -0.77
SEC13-214ENST00000476597 PDSS2Q86YH6 399 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 AFAP1L2Q8N4X5 818 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 NKAPQ8N5F7 415 aaKnown RBP10.21□□□□□ -0.77
SEC13-214ENST00000476597 AMER2Q8N7J2 671 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 BRIX1Q8TDN6 353 aaKnown RBP10.21□□□□□ -0.77
SEC13-214ENST00000476597 HAS2Q92819 552 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 MCMBPQ9BTE3 642 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 TUBB6Q9BUF5 446 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 VN1R1Q9GZP7 353 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 ANKHQ9HCJ1 492 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 AGPAT4Q9NRZ5 378 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 PTGFRNQ9P2B2 879 aa10.21□□□□□ -0.77
SEC13-214ENST00000476597 SHANK1Q9Y566 2161 aa10.21□□□□□ -0.78
SEC13-214ENST00000476597 FAM95CA0A1B0GW59 222 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 TRBC2A0A5B9 178 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 PABPN1LA6NDY0 278 aaKnown RBP10.2□□□□□ -0.78
SEC13-214ENST00000476597 FAM187AA6NFU0 413 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 WIPF3A6NGB9 483 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 SGK494L7N484 410 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 CDC7O00311 574 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 OR1F1O43749 312 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 CELA2AP08217 269 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 SLC35G6P0C7Q6 338 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 ZNF37AP17032 561 aaPredicted RBP10.2□□□□□ -0.78
SEC13-214ENST00000476597 SAT1P21673 171 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 XCR1P46094 333 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 SCTRP47872 440 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 TAS2R39P59534 338 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 AP2B1P63010 937 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 MRPS25P82663 173 aaKnown RBP10.2□□□□□ -0.78
SEC13-214ENST00000476597 MEF2AQ02078 507 aaPredicted RBP10.2□□□□□ -0.78
SEC13-214ENST00000476597 CDC16Q13042 620 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 CSHL1Q14406 222 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 ESPL1Q14674 2120 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 HERC3Q15034 1050 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 CATSPEREQ5SY80 951 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 ZBED8Q8IZ13 594 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 SIRT6Q8N6T7 355 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 BBOF1Q8ND07 529 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 ST6GALNAC3Q8NDV1 305 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 ZNF740Q8NDX6 193 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 PLPP5Q8NEB5 264 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 OR1N1Q8NGS0 311 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 ANKRD49Q8WVL7 239 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 SLC5A11Q8WWX8 675 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 METTL21AQ8WXB1 218 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 NEIL2Q969S2 332 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 MOCOSQ96EN8 888 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 CNDP1Q96KN2 507 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 ERP44Q9BS26 406 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 NSMCE4AQ9NXX6 385 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 PLA2G3Q9NZ20 509 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 HCN3Q9P1Z3 774 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 NAALAD2Q9Y3Q0 740 aa10.2□□□□□ -0.78
SEC13-214ENST00000476597 DYTNA2CJ06 578 aa10.19□□□□□ -0.78
SEC13-214ENST00000476597 OR2W5A6NFC9 320 aa10.19□□□□□ -0.78
SEC13-214ENST00000476597 GALR3O60755 368 aaPredicted RBP10.19□□□□□ -0.78
SEC13-214ENST00000476597 DNAJB6O75190 326 aa10.19□□□□□ -0.78
SEC13-214ENST00000476597 RDH16O75452 317 aa10.19□□□□□ -0.78
SEC13-214ENST00000476597 DDAH2O95865 285 aa10.19□□□□□ -0.78
SEC13-214ENST00000476597 RNF224P0DH78 156 aa10.19□□□□□ -0.78
SEC13-214ENST00000476597 ITGAMP11215 1152 aa10.19□□□□□ -0.78
SEC13-214ENST00000476597 ALOX12P18054 663 aa10.19□□□□□ -0.78
SEC13-214ENST00000476597 IL10P22301 178 aa10.19□□□□□ -0.78
SEC13-214ENST00000476597 TNFSF10P50591 281 aa10.19□□□□□ -0.78
SEC13-214ENST00000476597 ARG2P78540 354 aa10.19□□□□□ -0.78
SEC13-214ENST00000476597 CDKL1Q00532 357 aa10.19□□□□□ -0.78
SEC13-214ENST00000476597 ILF2Q12905 390 aaKnown RBP10.19□□□□□ -0.78
SEC13-214ENST00000476597 ELOAQ14241 798 aaKnown RBP10.19□□□□□ -0.78
SEC13-214ENST00000476597 MINDY4Q4G0A6 757 aa10.19□□□□□ -0.78
SEC13-214ENST00000476597 NXPE4Q6UWF7 544 aa10.19□□□□□ -0.78
SEC13-214ENST00000476597 CYS1Q717R9 158 aa10.19□□□□□ -0.78
SEC13-214ENST00000476597 MAATS1Q7Z4T9 603 aa10.19□□□□□ -0.78
SEC13-214ENST00000476597 CPEB2Q7Z5Q1 589 aaKnown RBP10.19□□□□□ -0.78
SEC13-214ENST00000476597 ANKRD37Q7Z713 158 aa10.19□□□□□ -0.78
SEC13-214ENST00000476597 THOC6Q86W42 341 aaKnown RBP10.19□□□□□ -0.78
SEC13-214ENST00000476597 CEP97Q8IW35 865 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms