RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, human

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-211	ENST00000475728	PEX12	O00623	359 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	TAPBP	O15533	448 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	P2RX6	O15547	441 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	LCMT2	O60294	686 aa	Known RBP	13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	CCNT2	O60583	730 aa	Known RBP	13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	MYBL2	P10244	700 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	PLA2G2A	P14555	144 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	SCTR	P47872	440 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	GLRB	P48167	497 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	KCNC1	P48547	511 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	ALDH18A1	P54886	795 aa	Known RBP	13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	RRAD	P55042	308 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	NFKB2	Q00653	900 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	MEF2A	Q02078	507 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	LAPTM5	Q13571	262 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	IL10RA	Q13651	578 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	HERC3	Q15034	1050 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	RBBP5	Q15291	538 aa	Known RBP	13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	NKG7	Q16617	165 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	C18orf21	Q32NC0	220 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	PAGE2B	Q5JRK9	111 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	ATP1A1-AS1	Q5TC04	95 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	TMEM214	Q6NUQ4	689 aa	Known RBP	13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	SLCO4C1	Q6ZQN7	724 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	APLF	Q8IW19	511 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	ADAMTS17	Q8TE56	1095 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	MIEF2	Q96C03	454 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	MMAB	Q96EY8	250 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	EFCAB11	Q9BUY7	163 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	NT5DC2	Q9H857	520 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	ANKH	Q9HCJ1	492 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	MKKS	Q9NPJ1	570 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	C14orf105	Q9NVL8	296 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	MAP4K5	Q9Y4K4	846 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	KCNMB2	Q9Y691	235 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	SLC22A7	Q9Y694	548 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	MAU2	Q9Y6X3	613 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	KALRN	O60229	2985 aa		13.74	□□□□□ -0.21
ABCF3-211	ENST00000475728	MAP2K7	O14733	419 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	PCDH17	O14917	1159 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	NDUFS4	O43181	175 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	RFPL1	O75677	317 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	NSA2	O95478	260 aa	Known RBP	13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	SERPIND1	P05546	499 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	ATXN8OS	P0DMR3	200 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	OTX2	P32243	289 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	GMPR	P36959	345 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	PIK3CG	P48736	1102 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	POLE2	P56282	527 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	IRF8	Q02556	426 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	HIST2H2AC	Q16777	129 aa	Predicted RBP	13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	LINC00303	Q3SY05	128 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	XKR6	Q5GH73	641 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	HIST2H2AA3	Q6FI13	130 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	WDR93	Q6P2C0	686 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	TMIGD1	Q6UXZ0	262 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	MED25	Q71SY5	747 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	COX15	Q7KZN9	410 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	ABHD13	Q7L211	337 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	ARHGEF39	Q8N4T4	335 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	METTL27	Q8N6F8	245 aa	Predicted RBP	13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	NT5C	Q8TCD5	201 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	ACMSD	Q8TDX5	336 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	UBE2E3	Q969T4	207 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	PTCD3	Q96EY7	689 aa	Known RBP	13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	SCYL1	Q96KG9	808 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	GPR78	Q96P69	363 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	MRPL57	Q9BQC6	102 aa	Known RBP	13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	YIPF2	Q9BWQ6	316 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	EPB41L4B	Q9H329	900 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	SYNPO2L	Q9H987	977 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	SEMA3G	Q9NS98	782 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	TRPC4	Q9UBN4	977 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	G3BP2	Q9UN86	482 aa	Known RBP	13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	ANGPTL3	Q9Y5C1	460 aa		13.73	□□□□□ -0.21
ABCF3-211	ENST00000475728	HEATR5B	Q9P2D3	2071 aa		13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	IGLV3-12	A0A075B6K2	115 aa		13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728		A0A0A6YYC8	382 aa	Predicted RBP	13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	VSTM2B	A6NLU5	285 aa		13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	MKRN2OS	H3BPM6	223 aa		13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728		I3L1I5	382 aa	Predicted RBP	13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	FOXS1	O43638	330 aa		13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	KLK8	O60259	260 aa		13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	SMIM24	O75264	130 aa		13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	MED26	O95402	600 aa		13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	TUBB	P07437	444 aa		13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	FURIN	P09958	794 aa		13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	MTHFD2	P13995	350 aa		13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	EPB42	P16452	691 aa		13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	MMP11	P24347	488 aa		13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	GCA	P28676	217 aa		13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	STXBP1	P61764	594 aa	Known RBP	13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	KCNAB2	Q13303	367 aa		13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	SLBP	Q14493	270 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	NAA30	Q147X3	362 aa	Predicted RBP	13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	SETDB1	Q15047	1291 aa		13.72	□□□□□ -0.21
ABCF3-211	ENST00000475728	TBCC	Q15814	346 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms