RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 C17orf62Q9BQA9 187 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 SLC6A16Q9GZN6 736 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 CHST8Q9H2A9 424 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 PRORYQ9H606 182 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 ZBTB26Q9HCK0 441 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 STARD5Q9NSY2 213 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 SENP1Q9P0U3 644 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 DHCR7Q9UBM7 475 aaKnown RBP16.13■□□□□ 0.17
SCAF11-206ENST00000474828 KCND3Q9UK17 655 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 CROTQ9UKG9 612 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 LHX6Q9UPM6 363 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 FER1L5A0AVI2 2057 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 MDC1Q14676 2089 aaKnown RBP16.12■□□□□ 0.17
SCAF11-206ENST00000474828 IGLV3-12A0A075B6K2 115 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 TLDC2A0PJX2 215 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 LRRC14BA6NHZ5 514 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 SMIM23A6NLE4 172 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 FOXS1O43638 330 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 OR1F1O43749 312 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 H2AFYO75367 372 aaKnown RBP16.12■□□□□ 0.17
SCAF11-206ENST00000474828 KATNA1O75449 491 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 ALBP02768 609 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 SMIM10L1P0DMW3 83 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 ATP5F1P24539 256 aaPredicted RBP16.12■□□□□ 0.17
SCAF11-206ENST00000474828 PRKAA2P54646 552 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 SNRPNP63162 240 aaKnown RBP16.12■□□□□ 0.17
SCAF11-206ENST00000474828 MEF2AQ02078 507 aaPredicted RBP16.12■□□□□ 0.17
SCAF11-206ENST00000474828 SRSF6Q13247 344 aaKnown RBP16.12■□□□□ 0.17
SCAF11-206ENST00000474828 ADPRMQ3LIE5 342 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 NKAIN1Q4KMZ8 207 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 BROXQ5VW32 411 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 LIPJQ5W064 366 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 C16orf46Q6P387 395 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 FAM199XQ6PEV8 388 aaPredicted RBP16.12■□□□□ 0.17
SCAF11-206ENST00000474828 TTLL10Q6ZVT0 673 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 COX15Q7KZN9 410 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 TRPV3Q8NET8 790 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 ZNF483Q8TF39 744 aaPredicted RBP16.12■□□□□ 0.17
SCAF11-206ENST00000474828 SLC13A3Q8WWT9 602 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 L3HYPDHQ96EM0 354 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 SMIM10Q96HG1 83 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 SCYL1Q96KG9 808 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 DCBLD2Q96PD2 775 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 NTMT1Q9BV86 223 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 IL17BQ9UHF5 180 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 PLLPQ9Y342 182 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 PTPRQQ9UMZ3 2332 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 NBEAQ8NFP9 2946 aa16.12■□□□□ 0.17
SCAF11-206ENST00000474828 VSTM2BA6NLU5 285 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 OR7A17O14581 309 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 TYROBPO43914 113 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 CLEC3AO75596 197 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 KLF7O75840 302 aaPredicted RBP16.11■□□□□ 0.17
SCAF11-206ENST00000474828 SERPINA6P08185 405 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 CD63P08962 238 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 H2AFXP16104 143 aaPredicted RBP16.11■□□□□ 0.17
SCAF11-206ENST00000474828 TCN2P20062 427 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 IMPDH1P20839 514 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 AGXTP21549 392 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 TMPRSS3P57727 454 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 HERVK_113P63132 956 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 IRF8Q02556 426 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 CHIT1Q13231 466 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 DNASE1L3Q13609 305 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 GTF2H2Q13888 395 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 SLBPQ14493 270 aaKnown RBP eCLIP16.11■□□□□ 0.17
SCAF11-206ENST00000474828 NCF4Q15080 339 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 XKR6Q5GH73 641 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 PAGE2BQ5JRK9 111 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 GRHL2Q6ISB3 625 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 GTF2H2CQ6P1K8 395 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 ZYG11AQ6WRX3 759 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 OVCH1Q7RTY7 1134 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 GOLGA7Q7Z5G4 137 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 VN1R5Q7Z5H4 357 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 VASH2Q86V25 355 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 SLC22A9Q8IVM8 553 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 KRT78Q8N1N4 520 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 TEX9Q8N6V9 391 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 SNX31Q8N9S9 440 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 MR1Q95460 341 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 KIAA1143Q96AT1 154 aaPredicted RBP16.11■□□□□ 0.17
SCAF11-206ENST00000474828 PHF21BQ96EK2 531 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 APOPT1Q96IL0 206 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 ERVK-6Q9BXR3 956 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 WDR54Q9H977 334 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 GPN2Q9H9Y4 310 aaPredicted RBP16.11■□□□□ 0.17
SCAF11-206ENST00000474828 SSU72Q9NP77 194 aaKnown RBP16.11■□□□□ 0.17
SCAF11-206ENST00000474828 TXLNGQ9NUQ3 528 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 PSD3Q9NYI0 1048 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 MRPS2Q9Y399 296 aaKnown RBP16.11■□□□□ 0.17
SCAF11-206ENST00000474828 ACTL7BQ9Y614 415 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 MGAQ8IWI9 3026 aa16.11■□□□□ 0.17
SCAF11-206ENST00000474828 SEC16AO15027 2179 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 H0YIG0 161 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 H0YIV9 168 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 COPEO14579 308 aa16.1■□□□□ 0.17
SCAF11-206ENST00000474828 CNOT3O75175 753 aaKnown RBP16.1■□□□□ 0.17
SCAF11-206ENST00000474828 NSA2O95478 260 aaKnown RBP16.1■□□□□ 0.17
SCAF11-206ENST00000474828 EIF2S1P05198 315 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms