RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ADAM29Q9UKF5 820 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 PCDHGB4Q9UN71 923 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 PRKAB1Q9Y478 270 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 PCYT1BQ9Y5K3 369 aaPredicted RBP20.91■□□□□ 0.94
CCM2-206ENST00000474617 NUMA1Q14980 2115 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 PCM1Q15154 2024 aa20.9■□□□□ 0.94
CCM2-206ENST00000474617 DPPA5A6NC42 116 aa20.9■□□□□ 0.94
CCM2-206ENST00000474617 GABRR3A8MPY1 467 aa20.9■□□□□ 0.94
CCM2-206ENST00000474617 UAP1L1Q3KQV9 507 aa20.9■□□□□ 0.94
CCM2-206ENST00000474617 WASH2PQ6VEQ5 465 aa20.9■□□□□ 0.94
CCM2-206ENST00000474617 CHST15Q7LFX5 561 aaPredicted RBP20.9■□□□□ 0.94
CCM2-206ENST00000474617 GPR155Q7Z3F1 870 aa20.9■□□□□ 0.94
CCM2-206ENST00000474617 CACUL1Q86Y37 369 aa20.9■□□□□ 0.94
CCM2-206ENST00000474617 TBC1D19Q8N5T2 526 aa20.9■□□□□ 0.94
CCM2-206ENST00000474617 OR2L8Q8NGY9 312 aa20.9■□□□□ 0.94
CCM2-206ENST00000474617 NUDT8Q8WV74 236 aa20.9■□□□□ 0.94
CCM2-206ENST00000474617 TFAP2CQ92754 450 aa20.9■□□□□ 0.94
CCM2-206ENST00000474617 NCLNQ969V3 563 aa20.9■□□□□ 0.94
CCM2-206ENST00000474617 C12orf66Q96MD2 445 aa20.9■□□□□ 0.94
CCM2-206ENST00000474617 PIF1Q9H611 641 aa20.9■□□□□ 0.94
CCM2-206ENST00000474617 OAZ3Q9UMX2 235 aa20.9■□□□□ 0.94
CCM2-206ENST00000474617 CEP290O15078 2479 aa20.9■□□□□ 0.94
CCM2-206ENST00000474617 TMEM265A0A087WTH1 108 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 C7orf72A4D263 438 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 COL4A2P08572 1712 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 LAMP1P11279 417 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 ACP5P13686 325 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 C6orf52Q5T4I8 152 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 ZNF621Q6ZSS3 439 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 EP400NLQ6ZTU2 488 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 ARMCX6Q7L4S7 300 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 ANKRD46Q86W74 232 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 ADHFE1Q8IWW8 467 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 RNF175Q8N4F7 328 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 TBC1D20Q96BZ9 403 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 SLC47A1Q96FL8 570 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 FERD3LQ96RJ6 166 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 SEPHS2Q99611 448 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 SLC29A1Q99808 456 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 CXorf56Q9H5V9 222 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 AASDHPPTQ9NRN7 309 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 PNPLA3Q9NST1 481 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 TAC3Q9UHF0 121 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 COLEC10Q9Y6Z7 277 aa20.89■□□□□ 0.94
CCM2-206ENST00000474617 ANTXRLA6NF34 631 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 LRRC72A6NJI9 287 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 SOCS2O14508 198 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 TNFRSF10CO14798 259 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 TPST1O60507 370 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 APBB3O95704 486 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 CKMT2P17540 419 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 ENGP17813 658 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 PKLRP30613 574 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 CDKN2CP42773 168 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 RXRGP48443 463 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 TRA2BP62995 288 aaKnown RBP20.88■□□□□ 0.93
CCM2-206ENST00000474617 ELOAQ14241 798 aaKnown RBP20.88■□□□□ 0.93
CCM2-206ENST00000474617 PON2Q15165 354 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 TEAD4Q15561 434 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 HKDC1Q2TB90 917 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 GTDC1Q4AE62 458 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 DEPDC1Q5TB30 811 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 KHDRBS2Q5VWX1 349 aaKnown RBP20.88■□□□□ 0.93
CCM2-206ENST00000474617 FAM71E1Q6IPT2 247 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 SLC9B2Q86UD5 537 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 EPHX4Q8IUS5 362 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 GPR156Q8NFN8 814 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 C16orf78Q8WTQ4 265 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 GFM2Q969S9 779 aaKnown RBP20.88■□□□□ 0.93
CCM2-206ENST00000474617 PPCDCQ96CD2 204 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 CNBD2Q96M20 576 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 CAMK1GQ96NX5 476 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 MRPS26Q9BYN8 205 aaKnown RBP20.88■□□□□ 0.93
CCM2-206ENST00000474617 SMPD3Q9NY59 655 aaPredicted RBP20.88■□□□□ 0.93
CCM2-206ENST00000474617 SH2B3Q9UQQ2 575 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 CROCCQ5TZA2 2017 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 SAC3D1A6NKF1 404 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 H0YAE9 185 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 ACOX3O15254 700 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 FURINP09958 794 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 HTR1BP28222 390 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 YPEL5P62699 121 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 PRDX1Q06830 199 aaKnown RBP20.88■□□□□ 0.93
CCM2-206ENST00000474617 KRT33BQ14525 404 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 VMACQ2NL98 169 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 TMEM35AQ53FP2 167 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 KRT80Q6KB66 452 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 MIEF2Q96C03 454 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 PYURFQ96I23 114 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 IL17FQ96PD4 163 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 OR2M4Q96R27 311 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 INSM2Q96T92 566 aaPredicted RBP20.88■□□□□ 0.93
CCM2-206ENST00000474617 OSGEPL1Q9H4B0 414 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 TPT1P8Q9HAU6 139 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 TM7SF3Q9NS93 570 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 SLC6A13Q9NSD5 602 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 SUFUQ9UMX1 484 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 USP22Q9UPT9 525 aa20.88■□□□□ 0.93
CCM2-206ENST00000474617 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.88■□□□□ 0.93
CCM2-206ENST00000474617 C1orf226A1L170 272 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms