RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 UGT8Q16880 541 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 DEFB109BQ30KR1 87 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 NIPAL1Q6NVV3 410 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 BORAQ6PGQ7 559 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 TMIGD1Q6UXZ0 262 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 SLCO4C1Q6ZQN7 724 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 VN1R4Q7Z5H5 301 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 TDRPQ86YL5 185 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 TEX9Q8N6V9 391 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 AENQ8WTP8 325 aaKnown RBP13.09□□□□□ -0.31
USF1-205ENST00000473969 THAP4Q8WY91 577 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 CCT6BQ92526 530 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 CAVIN3Q969G5 261 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 UBE2E3Q969T4 207 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 PHF21BQ96EK2 531 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 PTCD3Q96EY7 689 aaKnown RBP13.09□□□□□ -0.31
USF1-205ENST00000473969 C10orf90Q96M02 699 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 GPR78Q96P69 363 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 EFCAB11Q9BUY7 163 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 XPR1Q9UBH6 696 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 ZNF282Q9UDV7 671 aaPredicted RBP13.09□□□□□ -0.31
USF1-205ENST00000473969 SNRNP200O75643 2136 aaKnown RBP13.09□□□□□ -0.31
USF1-205ENST00000473969 ANKRD12Q6UB98 2062 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 A0A0A6YYC8 382 aaPredicted RBP13.08□□□□□ -0.32
USF1-205ENST00000473969 I3L1I5 382 aaPredicted RBP13.08□□□□□ -0.32
USF1-205ENST00000473969 GOLGA8RI6L899 631 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 P2RX6O15547 441 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 ONECUT2O95948 504 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 CAPN1P07384 714 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 GSTA1P08263 222 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 PYGBP11216 843 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 MTHFD2P13995 350 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 VARSP26640 1264 aaKnown RBP13.08□□□□□ -0.32
USF1-205ENST00000473969 GSTM2P28161 218 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 CCR10P46092 362 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 CCT5P48643 541 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 STXBP1P61764 594 aaKnown RBP13.08□□□□□ -0.32
USF1-205ENST00000473969 CHIT1Q13231 466 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 HERC3Q15034 1050 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 RASA2Q15283 850 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 MRPL14Q6P1L8 145 aaKnown RBP13.08□□□□□ -0.32
USF1-205ENST00000473969 METTL2BQ6P1Q9 378 aaKnown RBP13.08□□□□□ -0.32
USF1-205ENST00000473969 ABHD13Q7L211 337 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 MYLK4Q86YV6 388 aaPredicted RBP13.08□□□□□ -0.32
USF1-205ENST00000473969 RIBC1Q8N443 379 aaPredicted RBP13.08□□□□□ -0.32
USF1-205ENST00000473969 PTGR2Q8N8N7 351 aaPredicted RBP13.08□□□□□ -0.32
USF1-205ENST00000473969 ZNF740Q8NDX6 193 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 OR2Y1Q8NGV0 311 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 ZCCHC10Q8TBK6 192 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 EPS8L3Q8TE67 593 aaKnown RBP13.08□□□□□ -0.32
USF1-205ENST00000473969 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.08□□□□□ -0.32
USF1-205ENST00000473969 APOBEC4Q8WW27 367 aaKnown RBP13.08□□□□□ -0.32
USF1-205ENST00000473969 EXTL1Q92935 676 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 ATP6V1E2Q96A05 226 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 MIEF2Q96C03 454 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 TM4SF19Q96DZ7 209 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 VPS50Q96JG6 964 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 IP6K3Q96PC2 410 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 MACROD1Q9BQ69 325 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 NT5DC2Q9H857 520 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 GEMIN8Q9NWZ8 242 aaKnown RBP13.08□□□□□ -0.32
USF1-205ENST00000473969 TRPC4Q9UBN4 977 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 MAN2B2Q9Y2E5 1009 aa13.08□□□□□ -0.32
USF1-205ENST00000473969 SPTBP11277 2137 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 H0YIG0 161 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 PEX12O00623 359 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 NSA2O95478 260 aaKnown RBP13.07□□□□□ -0.32
USF1-205ENST00000473969 NUDT17P0C025 328 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 EEF1DP29692 281 aaKnown RBP13.07□□□□□ -0.32
USF1-205ENST00000473969 OTX2P32243 289 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 NFKB2Q00653 900 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 GTF2H2Q13888 395 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 DSG2Q14126 1118 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 DOC2AQ14183 400 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 NAA30Q147X3 362 aaPredicted RBP13.07□□□□□ -0.32
USF1-205ENST00000473969 PCBP2Q15366 365 aaKnown RBP eCLIP13.07□□□□□ -0.32
USF1-205ENST00000473969 TBR1Q16650 682 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 ATP1A1-AS1Q5TC04 95 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 TMEM214Q6NUQ4 689 aaKnown RBP13.07□□□□□ -0.32
USF1-205ENST00000473969 GTF2H2CQ6P1K8 395 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 KCT2Q8NC54 265 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 NT5CQ8TCD5 201 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 PPP4R1Q8TF05 950 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 SEC16BQ96JE7 1060 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 ROPN1BQ9BZX4 212 aaPredicted RBP13.07□□□□□ -0.32
USF1-205ENST00000473969 SLC26A1Q9H2B4 701 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 SPNS1Q9H2V7 528 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 WDR54Q9H977 334 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 ACTR8Q9H981 624 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 SYNPO2LQ9H987 977 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 ROPN1Q9HAT0 212 aaPredicted RBP13.07□□□□□ -0.32
USF1-205ENST00000473969 MKKSQ9NPJ1 570 aaPredicted RBP13.07□□□□□ -0.32
USF1-205ENST00000473969 RALYQ9UKM9 306 aaKnown RBP13.07□□□□□ -0.32
USF1-205ENST00000473969 RAB21Q9UL25 225 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 MAP4K5Q9Y4K4 846 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 SLC22A7Q9Y694 548 aa13.07□□□□□ -0.32
USF1-205ENST00000473969 A0A088AWK7 358 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 STX16-NPEPL1H3BU86 382 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 TK2O00142 265 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 STX16O14662 325 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms