RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 GRID1Q9ULK0 1009 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 GTF2A1LQ9UNN4 478 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 PPP1R3CQ9UQK1 317 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 YIPF1Q9Y548 306 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 LAMA5O15230 3695 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 KIAA1549LQ6ZVL6 1849 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 CCDC88CQ9P219 2028 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 GOLGA4Q13439 2230 aaKnown RBP1.42□□□□□ -2.18
CCDC39-203ENST00000473854 ABCB11O95342 1321 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 FRMPD4Q14CM0 1322 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 KIF26AQ9ULI4 1882 aaPredicted RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 ZFHX4Q86UP3 3567 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 LTBP2Q14767 1821 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 LRRK1Q38SD2 2015 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 IGLV3-22A0A075B6J6 115 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 A0A1B0GVC2 190 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 TRIM49BA6NDI0 452 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 GOLGA6L4A6NEF3 574 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 SMCO2A6NFE2 343 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 A6NLC8 198 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 OR6C76A6NM76 312 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 MPTX1A8MV57 137 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 TCP10L2B9ZVM9 353 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 FAM86B1E9PN63 330 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 GOLGA6L19H0YKK7 550 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 MPHOSPH10O00566 681 aaKnown RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 MEIS2O14770 477 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 ZBTB5O15062 677 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 LDLRAD4O15165 306 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 CTAGE5O15320 804 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 ATP6V0E1O15342 81 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 NEMFO60524 1076 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 ENTPD3O75355 529 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 JRKO75564 520 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 SNRNP200O75643 2136 aaKnown RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 SLCO2B1O94956 709 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 NKX2-2O95096 273 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 LETM1O95202 739 aaPredicted RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 SMC2O95347 1197 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 GH2P01242 217 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 LDHCP07864 332 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 HOXD4P09016 255 aaPredicted RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 FAM86B2P0C5J1 330 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 OR52Z1P0C646 297 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 EEF2P13639 858 aaKnown RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 CALML3P27482 149 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 ABCD3P28288 659 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 KIF5BP33176 963 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 CPOXP36551 454 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 NKX2-1P43699 371 aaPredicted RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 CTCFP49711 727 aaPredicted RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 GMPSP49915 693 aaPredicted RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 MMP15P51511 669 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 CDH11P55287 796 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 STX17P56962 302 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 KRTAP10-10P60014 251 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 VAMP2P63027 116 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 AKAP17AQ02040 695 aaKnown RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 MYL5Q02045 173 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 CXCL9Q07325 125 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 OLIG2Q13516 323 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 MTF1Q14872 753 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 QRICH1Q2TAL8 776 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 LETM2Q2VYF4 491 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 USH1GQ495M9 461 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 EIPR1Q53HC9 387 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 ZNF805Q5CZA5 627 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 FAM69AQ5T7M9 428 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 NAA35Q5VZE5 725 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 NSUN5P2Q63ZY6 315 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 KLHL10Q6JEL2 608 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 ARMCX5Q6P1M9 558 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 SASS6Q6UVJ0 657 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 TMEM179Q6ZVK1 233 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 CCDC186Q7Z3E2 898 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 CEACAM19Q7Z692 300 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 SLC25A42Q86VD7 318 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 HOGA1Q86XE5 327 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 CERS3Q8IU89 383 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 TMEM139Q8IV31 216 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 VSTM4Q8IW00 320 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 PM20D2Q8IYS1 436 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 CEP57L1Q8IYX8 460 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 ZNF444Q8N0Y2 327 aaPredicted RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 TMTC2Q8N394 836 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 RASGEF1CQ8N431 466 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 DNAJC22Q8N4W6 341 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 DCLK2Q8N568 766 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 C1orf52Q8N6N3 182 aaKnown RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 GMCL1P1Q8NEA9 526 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 TYMSOSQ8TAI1 123 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 ETNPPLQ8TBG4 499 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 KIAA1524Q8TCG1 905 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 HM13Q8TCT9 377 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 TBCKQ8TEA7 893 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 FAM151AQ8WW52 585 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 PSPC1Q8WXF1 523 aaKnown RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 TRIM44Q96DX7 344 aaPredicted RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 RNF125Q96EQ8 232 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 PAGE5Q96GU1 130 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms