RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 CHCHD6Q9BRQ6 235 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 MND1Q9BWT6 205 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 TP63Q9H3D4 680 aaPredicted RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 POLE4Q9NR33 117 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 LHX3Q9UBR4 397 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 UTS2RQ9UKP6 389 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 TMCC3Q9ULS5 477 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 FZD4Q9ULV1 537 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 SSR3Q9UNL2 185 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 DLGAP4Q9Y2H0 992 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 CDH23Q9H251 3354 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 KCNE1BA0A087WTH5 132 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 IQCF5A8MTL0 148 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 FADS2P1A8MWK0 482 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 AP2A2O94973 939 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 MFN2O95140 757 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 PTBP1P26599 531 aaKnown RBP eCLIP5.91□□□□□ -1.461e-6■■□□□ 13.4
HERC4-209ENST00000473533 CORO1AP31146 461 aaKnown RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 CSTF2P33240 577 aaKnown RBP eCLIP5.91□□□□□ -1.461e-6■■■□□ 19.1
HERC4-209ENST00000473533 SLC6A12P48065 614 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 GPR15P49685 360 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 GNG2P59768 71 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 CDK10Q15131 360 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 TAF12Q16514 161 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 GPR153Q6NV75 609 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 USP45Q70EL2 814 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 ANKRD46Q86W74 232 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 DENND1CQ8IV53 801 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 LGI4Q8N135 537 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 UTP15Q8TED0 518 aaKnown RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 TIFAQ96CG3 184 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 ASIC4Q96FT7 647 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 C7orf34Q96L11 122 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 MGLLQ99685 303 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 GON7Q9BXV9 100 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 PRM3Q9NNZ6 103 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 PCDH12Q9NPG4 1184 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 ASAH2Q9NR71 780 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 FARSBQ9NSD9 589 aaKnown RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 TAS2R9Q9NYW1 312 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 ADAM30Q9UKF2 790 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 RPL36Q9Y3U8 105 aaKnown RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 IQCMA0A1B0GVH7 501 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 SLC35F4A4IF30 521 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 SCO2O43819 266 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 TLL1O43897 1013 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 KIAA0513O60268 411 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 GJB3O75712 270 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 ENDOUP21128 410 aaKnown RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 SLC6A4P31645 630 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 HTR3AP46098 478 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 KCNJ10P78508 379 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 SF3B4Q15427 424 aaKnown RBP eCLIP5.91□□□□□ -1.46
HERC4-209ENST00000473533 TAB1Q15750 504 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 C18orf21Q32NC0 220 aaPredicted RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 PLAG1Q6DJT9 500 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 MZT2BQ6NZ67 158 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 C19orf48Q6RUI8 117 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 TPGS1Q6ZTW0 290 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 GDPD3Q7L5L3 318 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 PTOV1Q86YD1 416 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 PCSK9Q8NBP7 692 aaKnown RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 ATAD1Q8NBU5 361 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 KLHL6Q8WZ60 621 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 MTERF3Q96E29 417 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 KCNC2Q96PR1 638 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 LYSMD1Q96S90 227 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 PHOX2BQ99453 314 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 FEVQ99581 238 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 PIP5K1AQ99755 562 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 TSEN34Q9BSV6 310 aaKnown RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 MRPL9Q9BYD2 267 aaKnown RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 TMEM38AQ9H6F2 299 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 ELAC1Q9H777 363 aaKnown RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 CCSER2Q9H7U1 834 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 MARCH7Q9H992 704 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 LTB4R2Q9NPC1 389 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 GPRC5BQ9NZH0 403 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 GULP1Q9UBP9 304 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 PPT2Q9UMR5 302 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 PCDHGA2Q9Y5H1 932 aa5.91□□□□□ -1.46
HERC4-209ENST00000473533 MRPL42Q9Y6G3 142 aaKnown RBP5.91□□□□□ -1.46
HERC4-209ENST00000473533 PRR23AA6NEV1 266 aa5.9□□□□□ -1.46
HERC4-209ENST00000473533 DSCR3O14972 297 aa5.9□□□□□ -1.46
HERC4-209ENST00000473533 KMOO15229 486 aa5.9□□□□□ -1.46
HERC4-209ENST00000473533 SGTAO43765 313 aa5.9□□□□□ -1.46
HERC4-209ENST00000473533 ADAP00813 363 aa5.9□□□□□ -1.46
HERC4-209ENST00000473533 SCG5P05408 212 aa5.9□□□□□ -1.46
HERC4-209ENST00000473533 ITGB1P05556 798 aa5.9□□□□□ -1.46
HERC4-209ENST00000473533 ITGB6P18564 788 aa5.9□□□□□ -1.46
HERC4-209ENST00000473533 RHCEP18577 417 aa5.9□□□□□ -1.46
HERC4-209ENST00000473533 CA5AP35218 305 aa5.9□□□□□ -1.46
HERC4-209ENST00000473533 GDF5P43026 501 aa5.9□□□□□ -1.46
HERC4-209ENST00000473533 KCNQ1P51787 676 aa5.9□□□□□ -1.46
HERC4-209ENST00000473533 CHIT1Q13231 466 aa5.9□□□□□ -1.46
HERC4-209ENST00000473533 NCF4Q15080 339 aa5.9□□□□□ -1.46
HERC4-209ENST00000473533 RGNQ15493 299 aa5.9□□□□□ -1.46
HERC4-209ENST00000473533 MED22Q15528 200 aa5.9□□□□□ -1.46
HERC4-209ENST00000473533 SMN1Q16637 294 aaKnown RBP5.9□□□□□ -1.46
HERC4-209ENST00000473533 ANKRD34AQ69YU3 496 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms