RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 MT-ND3P03897 115 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 CCNYL3P0C7X3 344 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 ATXN8OSP0DMR3 200 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 KRT15P19012 456 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 OR1D4P47884 311 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 CCR8P51685 355 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 REEP5Q00765 189 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 ZNF844Q08AG5 666 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 IL10RAQ13651 578 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 TCTE1Q5JU00 501 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 COLEC12Q5KU26 742 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 ADNP2Q6IQ32 1131 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 C16orf46Q6P387 395 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 PRSS41Q7RTY9 318 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 TMPRSS11BQ86T26 416 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 CSNK1A1LQ8N752 337 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 UBTD2Q8WUN7 234 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 CD244Q9BZW8 370 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 MED4Q9NPJ6 270 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 IRAK4Q9NWZ3 460 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 GEMIN8Q9NWZ8 242 aaKnown RBP12.49□□□□□ -0.41
TPM3-216ENST00000473036 WWOXQ9NZC7 414 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 TMEM216Q9P0N5 145 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 XPR1Q9UBH6 696 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 PCDHGA6Q9Y5G7 932 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 SMIM23A6NLE4 172 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 C4orf51C9J302 202 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 PYCARD-AS1I3L0S3 204 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 DSCR3O14972 297 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 STK16O75716 305 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 KLF7O75840 302 aaPredicted RBP12.48□□□□□ -0.41
TPM3-216ENST00000473036 SIX3O95343 332 aaPredicted RBP12.48□□□□□ -0.41
TPM3-216ENST00000473036 PYGBP11216 843 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 COL6A2P12110 1019 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 ALAS2P22557 587 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 HRH2P25021 359 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 SCTRP47872 440 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 RPS15AP62244 130 aaKnown RBP12.48□□□□□ -0.41
TPM3-216ENST00000473036 HYAL2Q12891 473 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 CDC16Q13042 620 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 GRM7Q14831 915 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 NAA25Q14CX7 972 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 MRPL14Q6P1L8 145 aaKnown RBP12.48□□□□□ -0.41
TPM3-216ENST00000473036 VN1R5Q7Z5H4 357 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 TCAIMQ8N3R3 496 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 ENDOVQ8N8Q3 282 aaKnown RBP12.48□□□□□ -0.41
TPM3-216ENST00000473036 MFSD9Q8NBP5 474 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 KCT2Q8NC54 265 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 STARD8Q92502 1023 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 NDC1Q9BTX1 674 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 SLC25A18Q9H1K4 315 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 ACTL8Q9H568 366 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 PELI2Q9HAT8 420 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 DNAJC11Q9NVH1 559 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 CPSF2Q9P2I0 782 aaKnown RBP12.48□□□□□ -0.41
TPM3-216ENST00000473036 TUBD1Q9UJT1 453 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 EMCNQ9ULC0 261 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 ZNF490Q9ULM2 529 aaPredicted RBP12.48□□□□□ -0.41
TPM3-216ENST00000473036 ACTL7BQ9Y614 415 aa12.48□□□□□ -0.41
TPM3-216ENST00000473036 SCN2AQ99250 2005 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 A0A1B0GX78 115 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 TRBC2A0A5B9 178 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 PABPN1LA6NDY0 278 aaKnown RBP12.47□□□□□ -0.41
TPM3-216ENST00000473036 HMGB1P1B2RPK0 211 aaPredicted RBP12.47□□□□□ -0.41
TPM3-216ENST00000473036 FFAR3O14843 346 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 GPR42O15529 346 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 OR1F1O43749 312 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 DNAJB6O75190 326 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 KATNA1O75449 491 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 B3GALT4O96024 378 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 HBQ1P09105 142 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 PRKAR1AP10644 381 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 PTPN4P29074 926 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 CCT5P48643 541 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 EFNA3P52797 238 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 DCDP81605 110 aaKnown RBP12.47□□□□□ -0.41
TPM3-216ENST00000473036 E2F2Q14209 437 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 SETDB1Q15047 1291 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 NCF4Q15080 339 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 PFKFB4Q16877 469 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 NKAIN1Q4KMZ8 207 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 AGBL2Q5U5Z8 902 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 ATG9BQ674R7 924 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 TMEM214Q6NUQ4 689 aaKnown RBP12.47□□□□□ -0.41
TPM3-216ENST00000473036 RPS27LQ71UM5 84 aaKnown RBP12.47□□□□□ -0.41
TPM3-216ENST00000473036 PDSS2Q86YH6 399 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 LURAP1LQ8IV03 231 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 PROKR1Q8TCW9 393 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 CREB3L4Q8TEY5 395 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 EXTL1Q92935 676 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 ZBTB9Q96C00 473 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 WDR34Q96EX3 536 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 MESP1Q9BRJ9 268 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 NLNQ9BYT8 704 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 C12orf65Q9H3J6 166 aaKnown RBP12.47□□□□□ -0.41
TPM3-216ENST00000473036 KLHL31Q9H511 634 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 ACSS2Q9NR19 701 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 COPG2Q9UBF2 871 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 SRPK3Q9UPE1 567 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 FARSAQ9Y285 508 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms