RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 ATAD3AQ9NVI7 634 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 ADPRHL2Q9NX46 363 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 STOX2Q9P2F5 926 aaPredicted RBP13.16□□□□□ -0.3
BRCA1-209ENST00000470026 CD84Q9UIB8 345 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 RNF6Q9Y252 685 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 LYVE1Q9Y5Y7 322 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 A8MVJ9 347 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 GRM6O15303 877 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 MTX2O75431 263 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 PARNO95453 639 aaKnown RBP13.16□□□□□ -0.3
BRCA1-209ENST00000470026 URODP06132 367 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 LCKP06239 509 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 CD36P16671 472 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 ALDH4A1P30038 563 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 GGT2P36268 569 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 LSM3P62310 102 aaKnown RBP13.16□□□□□ -0.3
BRCA1-209ENST00000470026 POLR2LP62875 67 aaKnown RBP13.16□□□□□ -0.3
BRCA1-209ENST00000470026 SELENOWP63302 87 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 DGCR6Q14129 220 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 ELOAQ14241 798 aaKnown RBP13.16□□□□□ -0.3
BRCA1-209ENST00000470026 TEAD4Q15561 434 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 PAGE2BQ5JRK9 111 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 CPTPQ5TA50 214 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 AGAP7PQ5VUJ5 663 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 ASTLQ6HA08 431 aaPredicted RBP13.16□□□□□ -0.3
BRCA1-209ENST00000470026 AGTRAPQ6RW13 159 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 DDX53Q86TM3 631 aaKnown RBP13.16□□□□□ -0.3
BRCA1-209ENST00000470026 CHST14Q8NCH0 376 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 OR4C15Q8NGM1 316 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 RHOXF1Q8NHV9 184 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 CD99L2Q8TCZ2 262 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 ZNF689Q96CS4 500 aaPredicted RBP13.16□□□□□ -0.3
BRCA1-209ENST00000470026 MTERF1Q99551 399 aaKnown RBP13.16□□□□□ -0.3
BRCA1-209ENST00000470026 FAM83DQ9H4H8 585 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 NDUFAF4Q9P032 175 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 ZNF282Q9UDV7 671 aaPredicted RBP13.16□□□□□ -0.3
BRCA1-209ENST00000470026 ATP6V1HQ9UI12 483 aa13.16□□□□□ -0.3
BRCA1-209ENST00000470026 EXO1Q9UQ84 846 aaKnown RBP13.16□□□□□ -0.3
BRCA1-209ENST00000470026 TMEM247A6NEH6 219 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 LEFTY2O00292 366 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 QSOX1O00391 747 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 NRG2O14511 850 aaPredicted RBP13.15□□□□□ -0.3
BRCA1-209ENST00000470026 NPC1O15118 1278 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 LILRB3O75022 631 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 RFPL2O75678 378 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 TPP2P29144 1249 aaPredicted RBP13.15□□□□□ -0.3
BRCA1-209ENST00000470026 RRM2P31350 389 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 VIPR1P32241 457 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 TUBA1BP68363 451 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 SPIN4Q56A73 249 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 HENMT1Q5T8I9 393 aaKnown RBP13.15□□□□□ -0.3
BRCA1-209ENST00000470026 TMEM236Q5W0B7 351 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 BRAT1Q6PJG6 821 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 GDPD4Q6W3E5 623 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 AHSA2Q719I0 299 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 TUBA1AQ71U36 451 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 HSD11B1LQ7Z5J1 315 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 GPR65Q8IYL9 337 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 TRAM1L1Q8N609 369 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 C1orf52Q8N6N3 182 aaKnown RBP13.15□□□□□ -0.3
BRCA1-209ENST00000470026 C11orf65Q8NCR3 313 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 VPS37AQ8NEZ2 397 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.15□□□□□ -0.3
BRCA1-209ENST00000470026 RPL3LQ92901 407 aaKnown RBP13.15□□□□□ -0.3
BRCA1-209ENST00000470026 TIFAQ96CG3 184 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 RAD9AQ99638 391 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 DSN1Q9H410 356 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 RASSF1Q9NS23 344 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 GPATCH2Q9NW75 528 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 PAIP2BQ9ULR5 123 aaKnown RBP13.15□□□□□ -0.3
BRCA1-209ENST00000470026 ABT1Q9ULW3 272 aaKnown RBP13.15□□□□□ -0.3
BRCA1-209ENST00000470026 A3GALT2U3KPV4 340 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 HELZP42694 1942 aaKnown RBP13.15□□□□□ -0.3
BRCA1-209ENST00000470026 TRAV19A0A0A6YYK7 116 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 SLC5A10A0PJK1 596 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 TSPAN11A1L157 253 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 TMEM202A6NGA9 273 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 M0R082 166 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 TNFRSF21O75509 655 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 GABRB1P18505 474 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 PTX3P26022 381 aaPredicted RBP13.15□□□□□ -0.3
BRCA1-209ENST00000470026 CD40LGP29965 261 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 LIPAP38571 399 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 LIMK1P53667 647 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 ELP6Q0PNE2 266 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 SF1Q15637 639 aaKnown RBP13.15□□□□□ -0.3
BRCA1-209ENST00000470026 PLEKHG7Q6ZR37 379 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 LACC1Q8IV20 430 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 HS6ST3Q8IZP7 471 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 NAGSQ8N159 534 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 DNAJC22Q8N4W6 341 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 OR7G3Q8NG95 312 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 OR2A12Q8NGT7 310 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 AUTS2Q8WXX7 1259 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 SCAMP4Q969E2 229 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 TPD52L3Q96J77 140 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 BHLHE41Q9C0J9 482 aaPredicted RBP13.15□□□□□ -0.3
BRCA1-209ENST00000470026 RC3H2Q9HBD1 1191 aaKnown RBP13.15□□□□□ -0.3
BRCA1-209ENST00000470026 SGK2Q9HBY8 427 aa13.15□□□□□ -0.3
BRCA1-209ENST00000470026 TMEM184CQ9NVA4 438 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms