RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 NSL1Q96IY1 281 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 APOLD1Q96LR9 279 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 OR2A5Q96R48 311 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 MTERF1Q99551 399 aaKnown RBP12.21□□□□□ -0.45
TRAF4-208ENST00000469529 MS4A8Q9BY19 250 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 AIG1Q9NVV5 245 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 NOP53Q9NZM5 478 aaKnown RBP12.21□□□□□ -0.45
TRAF4-208ENST00000469529 ZIM2Q9NZV7 527 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 PDP2Q9P2J9 529 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 ADAM29Q9UKF5 820 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 EIF3LQ9Y262 564 aaKnown RBP12.21□□□□□ -0.45
TRAF4-208ENST00000469529 RUVBL1Q9Y265 456 aaKnown RBP12.21□□□□□ -0.45
TRAF4-208ENST00000469529 PCDHGA4Q9Y5G9 962 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 COPG1Q9Y678 874 aaKnown RBP12.21□□□□□ -0.45
TRAF4-208ENST00000469529 U3KQA8 63 aa12.21□□□□□ -0.45
TRAF4-208ENST00000469529 PSMD12O00232 456 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-208ENST00000469529 SIGLEC6O43699 453 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 OR1F1O43749 312 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 FOXD2O60548 495 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-208ENST00000469529 PRMT3O60678 531 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 SRPX2O60687 465 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-208ENST00000469529 THRAP10827 490 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 CKMT1AP12532 417 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 GPX3P22352 226 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 CD1CP29017 333 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 TSFMP43897 325 aaKnown RBP12.2□□□□□ -0.46
TRAF4-208ENST00000469529 LSSP48449 732 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 MNAT1P51948 309 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 DIO3P55073 304 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 RPS13P62277 151 aaKnown RBP12.2□□□□□ -0.46
TRAF4-208ENST00000469529 FOXK2Q01167 660 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 HMGCS1Q01581 520 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 RBBP5Q15291 538 aaKnown RBP12.2□□□□□ -0.46
TRAF4-208ENST00000469529 CCDC6Q16204 474 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 IMPG1Q17R60 797 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 SPIN4Q56A73 249 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 IL23RQ5VWK5 629 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 KHDRBS2Q5VWX1 349 aaKnown RBP12.2□□□□□ -0.46
TRAF4-208ENST00000469529 FCRL6Q6DN72 434 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 CCDC121Q6ZUS5 278 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 GATAD2AQ86YP4 633 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 TREML1Q86YW5 311 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 PLXDC1Q8IUK5 500 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 FNDC5Q8NAU1 212 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 GLB1L3Q8NCI6 653 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-208ENST00000469529 SRFBP1Q8NEF9 429 aaKnown RBP12.2□□□□□ -0.46
TRAF4-208ENST00000469529 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRAF4-208ENST00000469529 NT5CQ8TCD5 201 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 TCTN2Q96GX1 697 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 PRR11Q96HE9 360 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-208ENST00000469529 PPP1R36Q96LQ0 422 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 TRAPPC9Q96Q05 1148 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 EVA1BQ9NVM1 165 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 MAPRE3Q9UPY8 281 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 CAPN7Q9Y6W3 813 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 ANKRD12Q6UB98 2062 aa12.2□□□□□ -0.46
TRAF4-208ENST00000469529 ARHGEF17Q96PE2 2063 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-208ENST00000469529 CEP250Q9BV73 2442 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.19□□□□□ -0.46
TRAF4-208ENST00000469529 GSAPA4D1B5 854 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 LRIT2A6NDA9 550 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 TLCD2A6NGC4 264 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 UBOX5O94941 541 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 ETHE1O95571 254 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 MSL3P1P0C860 447 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 PCNAP12004 261 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 BCKDHAP12694 445 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 MAGP20916 626 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 CALB2P22676 271 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 JAK1P23458 1154 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 BCL6P41182 706 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 GSTM5P46439 218 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 CLDN8P56748 225 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 MEF2AQ02078 507 aaPredicted RBP12.19□□□□□ -0.46
TRAF4-208ENST00000469529 SF3A2Q15428 464 aaKnown RBP12.19□□□□□ -0.46
TRAF4-208ENST00000469529 MAPRE2Q15555 327 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 INAVAQ3KP66 663 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 AASDHQ4L235 1098 aaPredicted RBP12.19□□□□□ -0.46
TRAF4-208ENST00000469529 CACHD1Q5VU97 1274 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 NOXRED1Q6NXP6 359 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 RNF44Q7L0R7 432 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 KMT5CQ86Y97 462 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■■■■ 32.6
TRAF4-208ENST00000469529 MIER2Q8N344 545 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 DNAJC22Q8N4W6 341 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 MINDY1Q8N5J2 469 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 NETO1Q8TDF5 533 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 APIPQ96GX9 242 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 ZNF285Q96NJ3 590 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 TMEM74Q96NL1 305 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 CATSPER2Q96P56 530 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 QRFPRQ96P65 431 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 HBEGFQ99075 208 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 ZFYVE21Q9BQ24 234 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 RTKNQ9BST9 563 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 SLC52A3Q9NQ40 469 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 TAGLN3Q9UI15 199 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 SLC12A4Q9UP95 1085 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 DMXL1Q9Y485 3027 aa12.19□□□□□ -0.46
TRAF4-208ENST00000469529 MN1Q10571 1320 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms