RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 LZTFL1Q9NQ48 299 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 INTS10Q9NVR2 710 aaKnown RBP11.56□□□□□ -0.56
HDAC3-204ENST00000469207 TEKT2Q9UIF3 430 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 NPIPA1Q9UND3 350 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 PKDREJQ9NTG1 2253 aa11.56□□□□□ -0.56
HDAC3-204ENST00000469207 ZNF839A8K0R7 811 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 TTI1O43156 1089 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 KRT14P02533 472 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 ESRRAP11474 423 aaPredicted RBP11.55□□□□□ -0.56
HDAC3-204ENST00000469207 COX6B1P14854 86 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 PAMP19021 973 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 SLC1A2P43004 574 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 TBPL1P62380 186 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 OLR1P78380 273 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 CDK16Q00536 496 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 RBPJQ06330 500 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 ACTN3Q08043 901 aaPredicted RBP11.55□□□□□ -0.56
HDAC3-204ENST00000469207 THOC5Q13769 683 aaKnown RBP11.55□□□□□ -0.56
HDAC3-204ENST00000469207 TTLL9Q3SXZ7 439 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 SFT2D3Q587I9 215 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 RNFT1Q5M7Z0 435 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 GALNTL5Q7Z4T8 443 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.55□□□□□ -0.56
HDAC3-204ENST00000469207 SPPL2CQ8IUH8 684 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 KIF2BQ8N4N8 673 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 SLC13A3Q8WWT9 602 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 GPR137Q96N19 417 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 NDNQ99608 321 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 TRIM8Q9BZR9 551 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 CDCP1Q9H5V8 836 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 RUBCNLQ9H714 662 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 CHST11Q9NPF2 352 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 CCDC177Q9NQR7 707 aaPredicted RBP11.55□□□□□ -0.56
HDAC3-204ENST00000469207 PDE10AQ9Y233 779 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 NAALAD2Q9Y3Q0 740 aa11.55□□□□□ -0.56
HDAC3-204ENST00000469207 KCNE1BA0A087WTH5 132 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 FAM237BA0A1B0GVD1 139 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 CTAGE15A4D2H0 777 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 SDR42E2A6NKP2 422 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 GABRR3A8MPY1 467 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 CDH1P12830 882 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 RPS15AP62244 130 aaKnown RBP11.54□□□□□ -0.56
HDAC3-204ENST00000469207 RHAGQ02094 409 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 ALDH6A1Q02252 535 aaKnown RBP11.54□□□□□ -0.56
HDAC3-204ENST00000469207 OC90Q02509 493 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-204ENST00000469207 NAE1Q13564 534 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 PTK6Q13882 451 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 NSDHLQ15738 373 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 PHKG1Q16816 387 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 MEP1AQ16819 746 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 LONRF1Q17RB8 773 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 HSP90AA5PQ58FG0 334 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 CAPN13Q6MZZ7 669 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-204ENST00000469207 PAPD4Q6PIY7 484 aaKnown RBP11.54□□□□□ -0.56
HDAC3-204ENST00000469207 XKRXQ6PP77 449 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 AGTRAPQ6RW13 159 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 GDF7Q7Z4P5 450 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 ASPGQ86U10 573 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 CTAGE6Q86UF2 777 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 M1APQ8TC57 530 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 MCOLN3Q8TDD5 553 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 KCNJ9Q92806 393 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 PYCR2Q96C36 320 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 MS4A14Q96JA4 679 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 SIGLEC10Q96LC7 697 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 SERPINB12Q96P63 405 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 EBNA1BP2Q99848 306 aaKnown RBP11.54□□□□□ -0.56
HDAC3-204ENST00000469207 UTP23Q9BRU9 249 aaKnown RBP11.54□□□□□ -0.56
HDAC3-204ENST00000469207 AARSD1Q9BTE6 412 aaKnown RBP11.54□□□□□ -0.56
HDAC3-204ENST00000469207 CCDC68Q9H2F9 335 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 ANKHQ9HCJ1 492 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 LANCL2Q9NS86 450 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 IARS2Q9NSE4 1012 aaKnown RBP11.54□□□□□ -0.56
HDAC3-204ENST00000469207 C20orf96Q9NUD7 363 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-204ENST00000469207 SAMD15Q9P1V8 674 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 C19orf25Q9UFG5 118 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-204ENST00000469207 ZKSCAN5Q9Y2L8 839 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 ZNF835Q9Y2P0 537 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 ADGRG4Q8IZF6 3080 aa11.54□□□□□ -0.56
HDAC3-204ENST00000469207 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.53□□□□□ -0.56
HDAC3-204ENST00000469207 ASNA1O43681 348 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 NEURL1O76050 574 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 MYBL2P10244 700 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 NPPBP16860 134 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 GABRB3P28472 473 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 EEF1DP29692 281 aaKnown RBP11.53□□□□□ -0.56
HDAC3-204ENST00000469207 MAGEA6P43360 314 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 OR4D2P58180 307 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 AP2B1P63010 937 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 BTG2P78543 158 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 SARNPP82979 210 aaKnown RBP11.53□□□□□ -0.56
HDAC3-204ENST00000469207 ABRAXAS2Q15018 415 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 MAPKAPK3Q16644 382 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 SLC25A25Q6KCM7 469 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 PAQR3Q6TCH7 311 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 RPTNQ6XPR3 784 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 ZNF227Q86WZ6 799 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 SIAH3Q8IW03 269 aa11.53□□□□□ -0.56
HDAC3-204ENST00000469207 CHERPQ8IWX8 916 aaKnown RBP11.53□□□□□ -0.56
HDAC3-204ENST00000469207 CPSF7Q8N684 471 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms