RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 SLC22A7Q9Y694 548 aa18.08■□□□□ 0.48
COL7A1-207ENST00000467985 ESPL1Q14674 2120 aa18.07■□□□□ 0.48
COL7A1-207ENST00000467985 IGHV1-45A0A0A0MS14 117 aa18.07■□□□□ 0.48
COL7A1-207ENST00000467985 FEZF1A0PJY2 475 aa18.07■□□□□ 0.48
COL7A1-207ENST00000467985 TCP11X1B4DZS4 312 aa18.07■□□□□ 0.48
COL7A1-207ENST00000467985 EIF3HO15372 352 aaKnown RBP eCLIP18.07■□□□□ 0.48
COL7A1-207ENST00000467985 GUCA1CO95843 209 aa18.07■□□□□ 0.48
COL7A1-207ENST00000467985 PRR35P0CG20 571 aa18.07■□□□□ 0.48
COL7A1-207ENST00000467985 SAT1P21673 171 aa18.07■□□□□ 0.48
COL7A1-207ENST00000467985 SKP1P63208 163 aa18.07■□□□□ 0.48
COL7A1-207ENST00000467985 MFAP5Q13361 173 aa18.07■□□□□ 0.48
COL7A1-207ENST00000467985 PPP1R3AQ16821 1122 aa18.07■□□□□ 0.48
COL7A1-207ENST00000467985 SYT16Q17RD7 645 aa18.07■□□□□ 0.48
COL7A1-207ENST00000467985 B3GNTL1Q67FW5 361 aaPredicted RBP18.07■□□□□ 0.48
COL7A1-207ENST00000467985 NIPAL1Q6NVV3 410 aa18.07■□□□□ 0.48
COL7A1-207ENST00000467985 TMEM205Q6UW68 189 aa18.07■□□□□ 0.48
COL7A1-207ENST00000467985 CUZD1Q86UP6 607 aa18.07■□□□□ 0.48
COL7A1-207ENST00000467985 CISD2Q8N5K1 135 aaKnown RBP18.07■□□□□ 0.48
COL7A1-207ENST00000467985 MESP1Q9BRJ9 268 aa18.07■□□□□ 0.48
COL7A1-207ENST00000467985 RHOJQ9H4E5 214 aa18.07■□□□□ 0.48
COL7A1-207ENST00000467985 COPG1Q9Y678 874 aaKnown RBP18.07■□□□□ 0.48
COL7A1-207ENST00000467985 TRBC2A0A5B9 178 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 LCMT2O60294 686 aaKnown RBP18.06■□□□□ 0.48
COL7A1-207ENST00000467985 AGFG2O95081 481 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 STATHP02808 62 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 C8orf89P0DMQ9 161 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 GLRBP48167 497 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 PGGT1BP53609 377 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 SLC12A2P55011 1212 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 TAS2R39P59534 338 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 MAT1AQ00266 395 aaKnown RBP18.06■□□□□ 0.48
COL7A1-207ENST00000467985 CDKL1Q00532 357 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 EEF1A2Q05639 463 aaKnown RBP18.06■□□□□ 0.48
COL7A1-207ENST00000467985 PWP1Q13610 501 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 CSHL1Q14406 222 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 HERC3Q15034 1050 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 TLR1Q15399 786 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 ZXDCQ2QGD7 858 aaPredicted RBP18.06■□□□□ 0.48
COL7A1-207ENST00000467985 FAAH2Q6GMR7 532 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 TMEM207Q6UWW9 146 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 OR51Q1Q8NH59 317 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 SLC5A11Q8WWX8 675 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 CDKL2Q92772 493 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 C19orf60Q96EN9 201 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 MACROD1Q9BQ69 325 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 TUBB6Q9BUF5 446 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 AGPAT4Q9NRZ5 378 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 ASF1BQ9NVP2 202 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 TXNDC16Q9P2K2 825 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 C19orf25Q9UFG5 118 aaPredicted RBP18.06■□□□□ 0.48
COL7A1-207ENST00000467985 DYRK1BQ9Y463 629 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 CENPEQ02224 2701 aa18.06■□□□□ 0.48
COL7A1-207ENST00000467985 OR1F1O43749 312 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 IL1RNP18510 177 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 IL10P22301 178 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 TSFMP43897 325 aaKnown RBP18.05■□□□□ 0.48
COL7A1-207ENST00000467985 XCR1P46094 333 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 HNMTP50135 292 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 POU4F1Q01851 419 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 ZNF169Q14929 603 aaPredicted RBP18.05■□□□□ 0.48
COL7A1-207ENST00000467985 MINDY4Q4G0A6 757 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 C8orf74Q6P047 294 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 LINC00696Q6ZRV3 163 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 CYS1Q717R9 158 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 PRSS41Q7RTY9 318 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 ADAMTSL2Q86TH1 951 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 KCT2Q8NC54 265 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 ZCCHC10Q8TBK6 192 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 NEIL2Q969S2 332 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 OR4K3Q96R72 315 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 BARD1Q99728 777 aaKnown RBP18.05■□□□□ 0.48
COL7A1-207ENST00000467985 MCMBPQ9BTE3 642 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 VN1R1Q9GZP7 353 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 DPH5Q9H2P9 285 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 GPAMQ9HCL2 828 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 SAYSD1Q9NPB0 183 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 CTNNAL1Q9UBT7 734 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 UTP11Q9Y3A2 253 aaKnown RBP18.05■□□□□ 0.48
COL7A1-207ENST00000467985 OARD1Q9Y530 152 aa18.05■□□□□ 0.48
COL7A1-207ENST00000467985 SGK494L7N484 410 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 NDUFS4O43181 175 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 RAD51CO43502 376 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 WFS1O76024 890 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 UQCRHP07919 91 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 GSTA2P09210 222 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 SOX11P35716 441 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 AHRP35869 848 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 CAV1Q03135 178 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 PCOLCEQ15113 449 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 MFSD4BQ5TF39 518 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 FRA10AC1Q70Z53 315 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 THOC6Q86W42 341 aaKnown RBP18.04■□□□□ 0.48
COL7A1-207ENST00000467985 BRIX1Q8TDN6 353 aaKnown RBP18.04■□□□□ 0.48
COL7A1-207ENST00000467985 TSPAN17Q96FV3 270 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 CNDP1Q96KN2 507 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 CYTH2Q99418 400 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 PHACTR1Q9C0D0 580 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 L2HGDHQ9H9P8 463 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 PELI2Q9HAT8 420 aa18.04■□□□□ 0.48
COL7A1-207ENST00000467985 HCN3Q9P1Z3 774 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms