RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 FAM110BQ8TC76 370 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 GAL3ST4Q96RP7 486 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 MTG2Q9H4K7 406 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 EMCNQ9ULC0 261 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 RIIAD1A6NNX1 92 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 TPST2O60704 377 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 BCHEP06276 602 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 HTR1EP28566 365 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 MANEALQ5VSG8 457 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 SLC45A3Q96JT2 553 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 SORT1Q99523 831 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 C17orf62Q9BQA9 187 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 MID1O15344 667 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 ABLIM3O94929 683 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 F11P03951 625 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 IGFALSP35858 605 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 ARCN1P48444 511 aaKnown RBP13.33□□□□□ -0.28
BRAT1-203ENST00000467558 ARRB1P49407 418 aaPredicted RBP13.33□□□□□ -0.28
BRAT1-203ENST00000467558 PGDP52209 483 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 CLDN8P56748 225 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 ABATP80404 500 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 ANGPT1Q15389 498 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 ADGRG6Q86SQ4 1221 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 MCFD2Q8NI22 146 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 XKR8Q9H6D3 395 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 KLHL42Q9P2K6 505 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 BTBD3Q9Y2F9 522 aa13.33□□□□□ -0.28
BRAT1-203ENST00000467558 IGLV3-10A0A075B6K4 115 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 DFNA5O60443 496 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 KLKB1P03952 638 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 MYL9P24844 172 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 COX10Q12887 443 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 GANABQ14697 944 aaKnown RBP13.32□□□□□ -0.28
BRAT1-203ENST00000467558 MYBPC3Q14896 1274 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 UNC5DQ6UXZ4 953 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 CXXC5Q7LFL8 322 aaKnown RBP13.32□□□□□ -0.28
BRAT1-203ENST00000467558 ANKRD33Q7Z3H0 272 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 FBXO15Q8NCQ5 510 aaPredicted RBP13.32□□□□□ -0.28
BRAT1-203ENST00000467558 COPS4Q9BT78 406 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 CTPS2Q9NRF8 586 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 TAS2R9Q9NYW1 312 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 N6AMT1Q9Y5N5 214 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 OR5K4A6NMS3 321 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 CHST10O43529 356 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 HLA-FP30511 346 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 PPP1R8Q12972 351 aaKnown RBP13.32□□□□□ -0.28
BRAT1-203ENST00000467558 TYSND1Q2T9J0 566 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 KCTD8Q6ZWB6 473 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 GKN2Q86XP6 184 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 PDSS2Q86YH6 399 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 PRSS58Q8IYP2 241 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 NFKBIDQ8NI38 313 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 C8orf33Q9H7E9 229 aaPredicted RBP13.32□□□□□ -0.28
BRAT1-203ENST00000467558 GPRC5BQ9NZH0 403 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 A0A0U1RQS6 177 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 TP73O15350 636 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 ITGB7P26010 798 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 ANKRD26P1Q6NSI1 321 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 KIAA1161Q6NSJ0 714 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 KRTCAP2Q8N6L1 136 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 FGF13Q92913 245 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 RHBDF1Q96CC6 855 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 FBXL8Q96CD0 374 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 HSH2DQ96JZ2 352 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 DPYSL5Q9BPU6 564 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 SLC17A9Q9BYT1 436 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 NECTIN3Q9NQS3 549 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 LOXHD1Q8IVV2 1947 aa13.32□□□□□ -0.28
BRAT1-203ENST00000467558 KCNJ13O60928 360 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 SLC16A8O95907 504 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 C9P02748 559 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 STATHP02808 62 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 H1F0P07305 194 aaKnown RBP13.31□□□□□ -0.28
BRAT1-203ENST00000467558 TFPIP10646 304 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 GJA8P48165 433 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 ALDH3A2P51648 485 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 TNFAIP8L3Q5GJ75 292 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 SLCO6A1Q86UG4 719 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 ZBTB46Q86UZ6 589 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 P2RY8Q86VZ1 359 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 AURKBQ96GD4 344 aaPredicted RBP13.31□□□□□ -0.28
BRAT1-203ENST00000467558 LHX3Q9UBR4 397 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 PCDHB3Q9Y5E6 796 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 SSC5DA1L4H1 1573 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 ARHGEF15O94989 841 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 RPS17P08708 135 aaKnown RBP13.31□□□□□ -0.28
BRAT1-203ENST00000467558 ZNF33BQ06732 778 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 RPA4Q13156 261 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 PRRT3Q5FWE3 981 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 CRB2Q5IJ48 1285 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 FAM91A1Q658Y4 838 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 REEP3Q6NUK4 255 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 NXPE4Q6UWF7 544 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 LINC00471Q8N535 108 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 IL17FQ96PD4 163 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 RACGAP1Q9H0H5 632 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 SDR39U1Q9NRG7 319 aaPredicted RBP13.31□□□□□ -0.28
BRAT1-203ENST00000467558 HRASLS2Q9NWW9 162 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 POFUT2Q9Y2G5 429 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 PIAS3Q9Y6X2 628 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms