RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 SNRNP40Q96DI7 357 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 OR4K3Q96R72 315 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 BARD1Q99728 777 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 ILKAPQ9H0C8 392 aaPredicted RBP13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 AGPAT4Q9NRZ5 378 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 SEMA3GQ9NS98 782 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 MAP10Q9P2G4 905 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 NFU1Q9UMS0 254 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 DYRK1BQ9Y463 629 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 UNC79Q9P2D8 2635 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 PCSK5Q92824 1860 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 WIPF3A6NGB9 483 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 WISP3O95389 354 aaPredicted RBP13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 CBX6O95503 412 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 CD1DP15813 335 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 CRABP2P29373 138 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 ECHS1P30084 290 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 CCR8P51685 355 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 EMP3P54852 163 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 ATP6V0D1P61421 351 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 RPS15AP62244 130 aaKnown RBP13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 CDKL1Q00532 357 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 MEF2AQ02078 507 aaPredicted RBP13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 BMPR2Q13873 1038 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 ZKSCAN8Q15776 578 aaPredicted RBP13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 NKG7Q16617 165 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 C18orf21Q32NC0 220 aaPredicted RBP13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 CATSPEREQ5SY80 951 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 PRMT9Q6P2P2 845 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 IGFL2Q6UWQ7 119 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 RELL1Q8IUW5 271 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 TMEM151BQ8IW70 566 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 PPP4R1Q8TF05 950 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 TSNARE1Q96NA8 513 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 MACROD1Q9BQ69 325 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 CDC14AQ9UNH5 594 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 SLC22A14Q9Y267 594 aa13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 COPG1Q9Y678 874 aaKnown RBP13.36□□□□□ -0.27
CCHCR1-211ENST00000467553 SCN3AQ9NY46 2000 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 VSTM2BA6NLU5 285 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 POC1B-GALNT4F8VUJ3 575 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 PCDH17O14917 1159 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 P2RX6O15547 441 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 OR1F1O43749 312 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 WDR47O94967 919 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 ITGA3P26006 1051 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 GDF5P43026 501 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 HNMTP50135 292 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 RAPSNQ13702 412 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 ELOAQ14241 798 aaKnown RBP13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 TGFBIQ15582 683 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 OR4D1Q15615 310 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 EIF2S3LQ2VIR3 472 aaKnown RBP13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 CRB2Q5IJ48 1285 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 AGAP7PQ5VUJ5 663 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 SHISA6Q6ZSJ9 500 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 COX15Q7KZN9 410 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 TBC1D1Q86TI0 1168 aaPredicted RBP13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 LRRN4CLQ8ND94 238 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 SLC5A11Q8WWX8 675 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 NEIL2Q969S2 332 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 ESAMQ96AP7 390 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 RHBDF1Q96CC6 855 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 THAP11Q96EK4 314 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 MMABQ96EY8 250 aaPredicted RBP13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 UBXN10Q96LJ8 280 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 C10orf90Q96M02 699 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 AGAP4Q96P64 663 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 SPSB2Q99619 263 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 WDR77Q9BQA1 342 aaPredicted RBP13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 SOX17Q9H6I2 414 aaPredicted RBP13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 ACSS3Q9H6R3 686 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 CD274Q9NZQ7 290 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 RNF112Q9ULX5 631 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 ACOT9Q9Y305 439 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 PCDHGA10Q9Y5H3 936 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 DOCK10Q96BY6 2186 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 DOPEY1Q5JWR5 2465 aa13.35□□□□□ -0.27
CCHCR1-211ENST00000467553 KCNE1BA0A087WTH5 132 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 A0A0A6YYC8 382 aaPredicted RBP13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 I3L1I5 382 aaPredicted RBP13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 SOCS6O14544 535 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 FFAR3O14843 346 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 GPR42O15529 346 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 PRPF4O43172 522 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 SEMA7AO75326 666 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 S100BP04271 92 aaPredicted RBP13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 SERPIND1P05546 499 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 INHBAP08476 426 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 SLC35E2BP0CK96 405 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 FBLP22087 321 aaKnown RBP13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 BCL6P41182 706 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 KCNC1P48547 511 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 OCA2Q04671 838 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 DLG1Q12959 904 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 NDUFA9Q16795 377 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 TUBB8Q3ZCM7 444 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 FBXO48Q5FWF7 155 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 GARNL3Q5VVW2 1013 aa13.34□□□□□ -0.27
CCHCR1-211ENST00000467553 B3GNTL1Q67FW5 361 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms