RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 PINLYPA6NC86 204 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 C3orf70A6NLC5 250 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-203ENST00000467533 H7C0S8 307 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 CLDN4O14493 209 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 AQP7O14520 342 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 NSA2O95478 260 aaKnown RBP9.54□□□□□ -0.88
HDAC3-203ENST00000467533 APOA4P06727 396 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 PKMP14618 531 aaKnown RBP9.54□□□□□ -0.88
HDAC3-203ENST00000467533 GABRA1P14867 456 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 EZRP15311 586 aaKnown RBP9.54□□□□□ -0.88
HDAC3-203ENST00000467533 PECAM1P16284 738 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-203ENST00000467533 IL1RNP18510 177 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 NR2C2P49116 596 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 SNRPNP63162 240 aaKnown RBP9.54□□□□□ -0.88
HDAC3-203ENST00000467533 SORDQ00796 357 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 RHAGQ02094 409 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 KRTAP1-1Q07627 177 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 TSTA3Q13630 321 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-203ENST00000467533 TMED2Q15363 201 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 CCSMST1Q4G0I0 132 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 RANBP10Q6VN20 620 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 RGS9BPQ6ZS82 235 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 TRILQ7L0X0 811 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 ADCK2Q7Z695 626 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 VSIG1Q86XK7 387 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 CYP4X1Q8N118 509 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 PSD4Q8NDX1 1056 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 OR2M7Q8NG81 312 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 GSDMBQ8TAX9 411 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 HMGCLL1Q8TB92 370 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 SKA2Q8WVK7 121 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-203ENST00000467533 ASZ1Q8WWH4 475 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 KIAA1191Q96A73 305 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 RNF25Q96BH1 459 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-203ENST00000467533 SARAFQ96BY9 339 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 OR2A5Q96R48 311 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 GORASP1Q9BQQ3 440 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 LDAHQ9H6V9 325 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 DEPPQ9NTK1 212 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 NLE1Q9NVX2 485 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-203ENST00000467533 UTP6Q9NYH9 597 aaKnown RBP9.54□□□□□ -0.88
HDAC3-203ENST00000467533 KCMF1Q9P0J7 381 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 TRHDEQ9UKU6 1024 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 ERVK-11Q9UQG0 969 aa9.54□□□□□ -0.88
HDAC3-203ENST00000467533 ARID1AO14497 2285 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 SCN3AQ9NY46 2000 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 HEATR5BQ9P2D3 2071 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 MBD3L4A6NDZ8 208 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-203ENST00000467533 OR51F1A6NGY5 319 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 MBD3L5A6NJ08 208 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-203ENST00000467533 MAGEB17A8MXT2 336 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 SGK494L7N484 410 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 IGHG3P01860 377 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 MSNP26038 577 aaKnown RBP9.53□□□□□ -0.88
HDAC3-203ENST00000467533 RPA3P35244 121 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-203ENST00000467533 ADRA1AP35348 466 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 MAGEA5P43359 124 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 RUNX1T1Q06455 604 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 TYSND1Q2T9J0 566 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 C10orf62Q5T681 223 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-203ENST00000467533 ITPRIPL1Q6GPH6 555 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 HEPHL1Q6MZM0 1159 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 SUSD1Q6UWL2 747 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 FAM109AQ8N4B1 249 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 NAXEQ8NCW5 288 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 ZCCHC10Q8TBK6 192 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 LKAAEAR1Q8TD35 194 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 SMPDL3BQ92485 455 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 HAUS1Q96CS2 278 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 PEX11GQ96HA9 241 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 CDKN2AIPNLQ96HQ2 116 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 QKIQ96PU8 341 aaKnown RBP eCLIP9.53□□□□□ -0.88
HDAC3-203ENST00000467533 SPATA7Q9P0W8 599 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 ADGRE2Q9UHX3 823 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 TTC7AQ9ULT0 858 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-203ENST00000467533 RUVBL2Q9Y230 463 aaKnown RBP9.53□□□□□ -0.88
HDAC3-203ENST00000467533 EIF3LQ9Y262 564 aaKnown RBP9.53□□□□□ -0.88
HDAC3-203ENST00000467533 DRG1Q9Y295 367 aaKnown RBP9.53□□□□□ -0.88
HDAC3-203ENST00000467533 PCDHA3Q9Y5H8 950 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 MRFAP1Q9Y605 127 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 NFS1Q9Y697 457 aa9.53□□□□□ -0.88
HDAC3-203ENST00000467533 IGKV1-8A0A0C4DH67 115 aa9.52□□□□□ -0.89
HDAC3-203ENST00000467533 A0A0G2JMM0 328 aa9.52□□□□□ -0.89
HDAC3-203ENST00000467533 TRBV11-1A0A0K0K1C0 115 aa9.52□□□□□ -0.89
HDAC3-203ENST00000467533 A0A1B0GVC2 190 aa9.52□□□□□ -0.89
HDAC3-203ENST00000467533 A0A1W2PPB8 328 aa9.52□□□□□ -0.89
HDAC3-203ENST00000467533 A0A1W2PRS3 328 aa9.52□□□□□ -0.89
HDAC3-203ENST00000467533 SAGE2PA6NJ88 616 aa9.52□□□□□ -0.89
HDAC3-203ENST00000467533 KIR3DP1A8MWS1 328 aa9.52□□□□□ -0.89
HDAC3-203ENST00000467533 EEF1E1-BLOC1S5C9J1V9 151 aa9.52□□□□□ -0.89
HDAC3-203ENST00000467533 G3V3Y1 287 aa9.52□□□□□ -0.89
HDAC3-203ENST00000467533 HAT1O14929 419 aa9.52□□□□□ -0.89
HDAC3-203ENST00000467533 EEF1E1O43324 174 aaKnown RBP9.52□□□□□ -0.89
HDAC3-203ENST00000467533 OR1I1O60431 355 aa9.52□□□□□ -0.89
HDAC3-203ENST00000467533 RDH16O75452 317 aa9.52□□□□□ -0.89
HDAC3-203ENST00000467533 GPC4O75487 556 aa9.52□□□□□ -0.89
HDAC3-203ENST00000467533 ITGA10O75578 1167 aa9.52□□□□□ -0.89
HDAC3-203ENST00000467533 CCNDBP1O95273 360 aa9.52□□□□□ -0.89
HDAC3-203ENST00000467533 C1orf105O95561 183 aa9.52□□□□□ -0.89
HDAC3-203ENST00000467533 TP53P04637 393 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms