RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 H3BMM5 538 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 H7BY64 318 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 SGK494L7N484 410 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 PRRG2O14669 202 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 KIF5CO60282 957 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 DIAPH2O60879 1101 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 NDUFS3O75489 264 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 UQCRHP07919 91 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 HOXD4P09016 255 aaPredicted RBP11.44□□□□□ -0.58
UBR4-211ENST00000467272 ETS1P14921 441 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 ABOP16442 354 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 ZNF24P17028 368 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 IL10P22301 178 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 TPP2P29144 1249 aaPredicted RBP11.44□□□□□ -0.58
UBR4-211ENST00000467272 FMO4P31512 558 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 ANP32AP39687 249 aaKnown RBP11.44□□□□□ -0.58
UBR4-211ENST00000467272 EIF3BP55884 814 aaKnown RBP11.44□□□□□ -0.58
UBR4-211ENST00000467272 MLF1P58340 268 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 SLC26A5P58743 744 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 CRADDP78560 199 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 RPS6KA1Q15418 735 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 SPA17Q15506 151 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 KLHL38Q2WGJ6 581 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 MINDY4Q4G0A6 757 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 PAPD4Q6PIY7 484 aaKnown RBP11.44□□□□□ -0.58
UBR4-211ENST00000467272 CENPUQ71F23 418 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 RPS19BP1Q86WX3 136 aaKnown RBP11.44□□□□□ -0.58
UBR4-211ENST00000467272 SPNS2Q8IVW8 549 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 REXO1L1PQ8IX06 675 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 SLC5A8Q8N695 610 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 HORMAD2Q8N7B1 307 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 POGLUT1Q8NBL1 392 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 NFAM1Q8NET5 270 aaPredicted RBP11.44□□□□□ -0.58
UBR4-211ENST00000467272 C16orf52Q8NHV5 167 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 TSLPQ969D9 159 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 THAP11Q96EK4 314 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 PRAP1Q96NZ9 151 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 OR1F2PQ96R84 312 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 EBNA1BP2Q99848 306 aaKnown RBP11.44□□□□□ -0.58
UBR4-211ENST00000467272 MACROD1Q9BQ69 325 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 IL22Q9GZX6 179 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 TMEM184CQ9NVA4 438 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 HCN3Q9P1Z3 774 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 RNF6Q9Y252 685 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 SLC22A7Q9Y694 548 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 AKAP6Q13023 2319 aa11.44□□□□□ -0.58
UBR4-211ENST00000467272 FEZF1A0PJY2 475 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 ZNF839A8K0R7 811 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 FOXO6A8MYZ6 492 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 MIF4GDA9UHW6 222 aaKnown RBP11.43□□□□□ -0.58
UBR4-211ENST00000467272 SMAPO00193 183 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 DNAJB6O75190 326 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 STATHP02808 62 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 CD99P14209 185 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 IL1RNP18510 177 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 HRH2P25021 359 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 IMPA1P29218 277 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 CHRNB4P30926 498 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 NR0B1P51843 470 aaKnown RBP11.43□□□□□ -0.58
UBR4-211ENST00000467272 IST1P53990 364 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 RPS15AP62244 130 aaKnown RBP11.43□□□□□ -0.58
UBR4-211ENST00000467272 ABRAXAS2Q15018 415 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 RNF187Q5TA31 235 aaPredicted RBP11.43□□□□□ -0.58
UBR4-211ENST00000467272 TGIF2LYQ8IUE0 185 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 EID3Q8N140 333 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 RPRMLQ8N4K4 120 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 KIF2BQ8N4N8 673 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 ZFP62Q8NB50 900 aaPredicted RBP11.43□□□□□ -0.58
UBR4-211ENST00000467272 KCT2Q8NC54 265 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 MFSD3Q96ES6 412 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 LPAR4Q99677 370 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 SARGQ9BW04 601 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 FRMD8P1Q9BZ68 369 aaPredicted RBP11.43□□□□□ -0.58
UBR4-211ENST00000467272 CDCP1Q9H5V8 836 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 RAB6BQ9NRW1 208 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 PACSIN2Q9UNF0 486 aaPredicted RBP11.43□□□□□ -0.58
UBR4-211ENST00000467272 SH2B3Q9UQQ2 575 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 HCFC1P51610 2035 aa11.43□□□□□ -0.58
UBR4-211ENST00000467272 ABCA4P78363 2273 aa11.42□□□□□ -0.58
UBR4-211ENST00000467272 IGKV3D-11A0A0A0MRZ8 115 aa11.42□□□□□ -0.58
UBR4-211ENST00000467272 A0A1B0GTH9 108 aa11.42□□□□□ -0.58
UBR4-211ENST00000467272 NKX2-6A6NCS4 301 aa11.42□□□□□ -0.58
UBR4-211ENST00000467272 LCMT2O60294 686 aaKnown RBP11.42□□□□□ -0.58
UBR4-211ENST00000467272 RDH16O75452 317 aa11.42□□□□□ -0.58
UBR4-211ENST00000467272 VAPBO95292 243 aa11.42□□□□□ -0.58
UBR4-211ENST00000467272 CATP04040 527 aaKnown RBP11.42□□□□□ -0.58
UBR4-211ENST00000467272 APRTP07741 180 aa11.42□□□□□ -0.58
UBR4-211ENST00000467272 RPL22P35268 128 aaKnown RBP11.42□□□□□ -0.58
UBR4-211ENST00000467272 PTGS2P35354 604 aa11.42□□□□□ -0.58
UBR4-211ENST00000467272 CYLC1P35663 651 aaPredicted RBP11.42□□□□□ -0.58
UBR4-211ENST00000467272 NPY2RP49146 381 aa11.42□□□□□ -0.58
UBR4-211ENST00000467272 HLCSP50747 726 aa11.42□□□□□ -0.58
UBR4-211ENST00000467272 NSDHLQ15738 373 aa11.42□□□□□ -0.58
UBR4-211ENST00000467272 MRNIPQ6NTE8 343 aa11.42□□□□□ -0.58
UBR4-211ENST00000467272 ZNF549Q6P9A3 640 aa11.42□□□□□ -0.58
UBR4-211ENST00000467272 RAD9BQ6WBX8 426 aa11.42□□□□□ -0.58
UBR4-211ENST00000467272 KIAA0408Q6ZU52 694 aa11.42□□□□□ -0.58
UBR4-211ENST00000467272 CILP2Q8IUL8 1156 aa11.42□□□□□ -0.58
UBR4-211ENST00000467272 FAM98AQ8NCA5 519 aaKnown RBP11.42□□□□□ -0.58
UBR4-211ENST00000467272 ASB5Q8WWX0 329 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms