RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 FAM120CQ9NX05 1096 aaKnown RBP12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 ERVK13-1Q9NX77 482 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 MBD1Q9UIS9 605 aaPredicted RBP12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 SLC22A14Q9Y267 594 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 ZNF106Q9H2Y7 1883 aaKnown RBP12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 IDH3BO43837 385 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 ADAMTS4O75173 837 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 EOMESO95936 686 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 RPLP2P05387 115 aaKnown RBP12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 ITPKAP23677 461 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 GAB1Q13480 694 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 LRRC26Q2I0M4 334 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 BCL7AQ4VC05 210 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 CDKL4Q5MAI5 379 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 SPANXN2Q5MJ10 180 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 RTP2Q5QGT7 225 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 ZNF605Q86T29 641 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 UBQLNLQ8IYU4 475 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 OR4C15Q8NGM1 316 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 OR52J3Q8NH60 311 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 KCNS3Q9BQ31 491 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 CCM2Q9BSQ5 444 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 KLK4Q9Y5K2 254 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 CFAP20Q9Y6A4 193 aaKnown RBP12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 C1orf226A1L170 272 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 ZNF840PA6NDX5 716 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 APOA1P02647 267 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 KRT8P05787 483 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 B4GALNT1Q00973 533 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 LYPLAL1Q5VWZ2 237 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 RGMBQ6NW40 437 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 C19orf48Q6RUI8 117 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 SLC24A5Q71RS6 500 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 TSPAN33Q86UF1 283 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 ATCAYQ86WG3 371 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 HOMEZQ8IX15 550 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 B3GNT7Q8NFL0 401 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 SPPL2AQ8TCT8 520 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 CEP44Q9C0F1 390 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 NDEL1Q9GZM8 345 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 ADPRHL2Q9NX46 363 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 HCSTQ9UBK5 93 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 ZNF221Q9UK13 617 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 OR51B4Q9Y5P0 310 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 PNMA8CA0A1B0GUJ8 204 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 PRAMEF25A6NGN4 478 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 HOXC11O43248 304 aaPredicted RBP12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 SMAD6O43541 496 aaKnown RBP12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 PCDH7O60245 1069 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 PRMT3O60678 531 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 OPN1SWP03999 348 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 CBSLP0DN79 551 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 CD22P20273 847 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 CCND3P30281 292 aaPredicted RBP12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 CBSP35520 551 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 SLC15A1P46059 708 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 RGNQ15493 299 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 LRRC66Q68CR7 880 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 TTC23LQ6PF05 361 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 VRK3Q8IV63 474 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 GPR26Q8NDV2 337 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 WFDC5Q8TCV5 224 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 UTP15Q8TED0 518 aaKnown RBP12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 C17orf50Q8WW18 174 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 PLD4Q96BZ4 506 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 NEDD4LQ96PU5 975 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 OR2A14Q96R47 310 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 CDK5RAP1Q96SZ6 601 aaKnown RBP12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 SLC12A9Q9BXP2 914 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 OR2B2Q9GZK3 357 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 RNF38Q9H0F5 515 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 MARCH5Q9NX47 278 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 MS4A12Q9NXJ0 267 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 NPAP1Q9NZP6 1156 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 SNX8Q9Y5X2 465 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 SERTM1A2A2V5 107 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 PDZK1P1A8MUH7 402 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 LOC110117498-PIK3R3F6TDL0 507 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 HLA-EP13747 358 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 CXCR2P25025 360 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 SPAM1P38567 509 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 AP1S1P61966 158 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 CHIT1Q13231 466 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 TSTQ16762 297 aaKnown RBP12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 GPR33Q49SQ1 333 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 FAM26DQ5JW98 314 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 HECTD3Q5T447 861 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 ANKS3Q6ZW76 656 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 NRARPQ7Z6K4 114 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 NAGSQ8N159 534 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 DENND6BQ8NEG7 585 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 PIK3R3Q92569 461 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 ROGDIQ9GZN7 287 aa12.52□□□□□ -0.41
PDZRN3-205ENST00000466780 FAM172BPA6NC97 362 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 AGAP14A8MT82 685 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 ADAM12O43184 909 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 TNFSF8P32971 234 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 PCGF2P35227 344 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 OR1E2P47887 323 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 SELENOWP63302 87 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms