RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 MAGEC3Q8TD91 643 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 SSC4DQ8WTU2 575 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 TSPEARQ8WU66 669 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 FBXL8Q96CD0 374 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 TUBGCP3Q96CW5 907 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 TAAR9Q96RI9 348 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 TMEM79Q9BSE2 394 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 SLC25A23Q9BV35 468 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 EFCAB1Q9HAE3 211 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 OCIAD1Q9NX40 245 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 CNOT6Q9ULM6 557 aaKnown RBP13.32□□□□□ -0.28
HDAC6-215ENST00000465457 PDE10AQ9Y233 779 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 PCDHGA3Q9Y5H0 932 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 MRPS18BQ9Y676 258 aaKnown RBP13.32□□□□□ -0.28
HDAC6-215ENST00000465457 DNMT3AQ9Y6K1 912 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-215ENST00000465457 LOC101059948A0A1B0GTJ6 334 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 TMEM202A6NGA9 273 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 OR2AG2A6NM03 316 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 OR7A17O14581 309 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 INPP4BO15327 924 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 TAPBPO15533 448 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 CPNE6O95741 557 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 PRR35P0CG20 571 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 HMOX2P30519 316 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 CPOXP36551 454 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 DCTP40126 519 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 ARL1P40616 181 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-215ENST00000465457 CPA2P48052 419 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 SLC6A12P48065 614 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 TRAF3Q13114 568 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 RPA4Q13156 261 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 CUL3Q13618 768 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 FASTKQ14296 549 aaKnown RBP13.31□□□□□ -0.28
HDAC6-215ENST00000465457 INPP5AQ14642 412 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 GGTA1PQ4G0N0 100 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 TMEM198Q66K66 360 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 OGFOD3Q6PK18 319 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 TMEM220Q6QAJ8 160 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 NET1Q7Z628 596 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-215ENST00000465457 MILR1Q7Z6M3 343 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 ADGRG6Q86SQ4 1221 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 SNX32Q86XE0 403 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 SCUBE1Q8IWY4 988 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 KLHDC8AQ8IYD2 350 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 MIER2Q8N344 545 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 PLA2G15Q8NCC3 412 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 OR6C4Q8NGE1 309 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 METTL6Q8TCB7 284 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 HM13Q8TCT9 377 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 COX14Q96I36 57 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 SLC45A3Q96JT2 553 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 CCDC138Q96M89 665 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 SERPINI1Q99574 410 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 APOOQ9BUR5 198 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 B3GNT4Q9C0J1 378 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 TMEM168Q9H0V1 697 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 DPEP2Q9H4A9 486 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 AKTIPQ9H8T0 292 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 POLG2Q9UHN1 485 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 TSR3Q9UJK0 312 aaKnown RBP13.31□□□□□ -0.28
HDAC6-215ENST00000465457 ST14Q9Y5Y6 855 aa13.31□□□□□ -0.28
HDAC6-215ENST00000465457 SLC28A1O00337 649 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 UGDHO60701 494 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 OR4F21O95013 312 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 KRT6AP02538 564 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 PDGFAP04085 211 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 KRT6BP04259 564 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 PCCBP05166 539 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 PNLIPP16233 465 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 KRT6CP48668 564 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 CTSCP53634 463 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 FOXA1P55317 472 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 ERVK-8P63133 956 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 MAD2L1Q13257 205 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-215ENST00000465457 COQ5Q5HYK3 327 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 FHL5Q5TD97 284 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 NKAIN2Q5VXU1 208 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 PNCKQ6P2M8 343 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 TAF8Q7Z7C8 310 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 TRAPPC5Q8IUR0 188 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 ULK2Q8IYT8 1036 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 POU5F2Q8N7G0 328 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 CDYL2Q8N8U2 506 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 OR4F6Q8NGB9 312 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 GPBAR1Q8TDU6 330 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 PATE1Q8WXA2 126 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 DLG3Q92796 817 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 PPP3R2Q96LZ3 170 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 WDR92Q96MX6 357 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 MRPL1Q9BYD6 325 aaKnown RBP13.3□□□□□ -0.28
HDAC6-215ENST00000465457 OR2AG1Q9H205 316 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 GPN2Q9H9Y4 310 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-215ENST00000465457 SDR39U1Q9NRG7 319 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-215ENST00000465457 BAIAP2L1Q9UHR4 511 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 PILRAQ9UKJ1 303 aa13.3□□□□□ -0.28
HDAC6-215ENST00000465457 LOC100653049A0A140TA62 436 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 DYTNA2CJ06 578 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 MGAT4DA6NG13 374 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 PPP6CO00743 305 aa13.29□□□□□ -0.28
HDAC6-215ENST00000465457 RGS14O43566 566 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms